RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 EXOC3O60645 756 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 CAVIN2O95810 425 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 RECQLP46063 649 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 TFCP2Q12800 502 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 DMP1Q13316 513 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 EFCAB13Q8IY85 973 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 THEM5Q8N1Q8 247 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SDR16C5Q8N3Y7 309 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SUGCTQ9HAC7 445 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SLAIN2Q9P270 581 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 EVLQ9UI08 416 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 CUL7Q14999 1698 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 ANO6Q4KMQ2 910 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 RINT1Q6NUQ1 792 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SDCCAG8Q86SQ7 713 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 RTKN2Q8IZC4 609 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 NLRP7Q8WX94 980 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 POMGNT1Q8WZA1 660 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 TRMT1Q9NXH9 659 aaKnown RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 BAG5Q9UL15 447 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 PRR12Q9ULL5 1215 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 FARP1Q9Y4F1 1045 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 I3L4J1 428 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 CASQ2O14958 399 aaPredicted RBP6.31□□□□□ -1.4
HERC4-206ENST00000427635 TMEM191BP0C7N4 346 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 NNMTP40261 264 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 ARMCX5Q6P1M9 558 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 SCYL1Q96KG9 808 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 KDM5BQ9UGL1 1544 aa6.31□□□□□ -1.4
HERC4-206ENST00000427635 KAT6BQ8WYB5 2073 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CTAGE15A4D2H0 777 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CTAGE8P0CG41 777 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 PPARGP37231 505 aaPredicted RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 TXKP42681 527 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 XKR9Q5GH70 373 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 ICE2Q659A1 982 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 TMC4Q7Z404 712 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CTAGE6Q86UF2 777 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CTAGE4Q8IX94 777 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CACTINQ8WUQ7 758 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 LARP6Q9BRS8 491 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 ARMT1Q9H993 441 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 FLT4P35916 1363 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CTAGE9A4FU28 777 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 GRIN3BO60391 1043 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 GSTA1P08263 222 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 GSTA2P09210 222 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 ARL4DP49703 201 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 IQCB1Q15051 598 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 SEPT14Q6ZU15 432 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 RDH13Q8NBN7 331 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 MRPS27Q92552 414 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 KBTBD13C9JR72 458 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 KCNA6P17658 529 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 CD53P19397 219 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 RBBP5Q15291 538 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 ZNF174Q15697 407 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 ZSCAN30Q86W11 494 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 VCXQ9H320 206 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 RMI1Q9H9A7 625 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 DIS3Q9Y2L1 958 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 GARSP41250 739 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 MMP14P50281 582 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 BPIFB4P59827 614 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 GNG11P61952 73 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 SLFN5Q08AF3 891 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 INTS8Q75QN2 995 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 GDAP1Q8TB36 358 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 IP6K1Q92551 441 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 STMN2Q93045 179 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 DOLKQ9UPQ8 538 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 UTP11Q9Y3A2 253 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 RBM8AQ9Y5S9 174 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 CDK13Q14004 1512 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 URB2Q14146 1524 aaKnown RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 RTL1A6NKG5 1358 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 IQCA1LA6NCM1 817 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 DEXIO95424 95 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 TBCCQ15814 346 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 BSPRYQ5W0U4 402 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 SLFN12Q8IYM2 578 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 RNF217Q8TC41 542 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
HERC4-206ENST00000427635 CFAP36Q96G28 342 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 LRRC2Q9BYS8 371 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
HERC4-206ENST00000427635 ARPP21Q9UBL0 812 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms