RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
HDLBP-215ENST00000427487 MYPNQ86TC9 1320 aa14.03□□□□□ -0.16
HDLBP-215ENST00000427487 STK36Q9NRP7 1315 aa14.03□□□□□ -0.16
HDLBP-215ENST00000427487 IRF6O14896 467 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 HUNKP57058 714 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 FMR1Q06787 632 aaKnown RBP eCLIP14.02□□□□□ -0.171e-8■■■□□ 17
HDLBP-215ENST00000427487 FUT2Q10981 343 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 SNAPC2Q13487 334 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 MTMR2Q13614 643 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 MOB2Q70IA6 237 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 FAM160B2Q86V87 743 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 SMARCC2Q8TAQ2 1214 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 CHURC1Q8WUH1 139 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 CCDC102AQ96A19 550 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 WNK4Q96J92 1243 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 CLMNQ96JQ2 1002 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.17
HDLBP-215ENST00000427487 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 ELP3Q9H9T3 547 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 CWC22Q9HCG8 908 aaKnown RBP14.02□□□□□ -0.17
HDLBP-215ENST00000427487 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 PNMA2Q9UL42 364 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 SLC45A1Q9Y2W3 748 aa14.02□□□□□ -0.17
HDLBP-215ENST00000427487 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 KLRF2D3W0D1 207 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 CDC27P30260 824 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 HOXA7P31268 230 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 ADD1P35611 737 aaKnown RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 GTF2A2P52657 109 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 ST3GAL1Q11201 340 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 SPRYD7Q5W111 196 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 TEX2Q8IWB9 1127 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 TRIM22Q8IYM9 498 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 LARP6Q9BRS8 491 aaKnown RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 MYL10Q9BUA6 226 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 DAXXQ9UER7 740 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 FEM1BQ9UK73 627 aa14.01□□□□□ -0.17
HDLBP-215ENST00000427487 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-215ENST00000427487 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 TRIM75PA6NK02 468 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 PRPF3O43395 683 aaKnown RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 VCAM1P19320 739 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 APLP1P51693 650 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 STAT2P52630 851 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 INHBEP58166 350 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 TRAF1Q13077 416 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 STK3Q13188 491 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 PABPC4Q13310 644 aaKnown RBP eCLIP14□□□□□ -0.17
HDLBP-215ENST00000427487 RGMBQ6NW40 437 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 NBPF11Q86T75 865 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 CCDC83Q8IWF9 413 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 NECAB1Q8N987 351 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 NSUN7Q8NE18 718 aaKnown RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 WASF1Q92558 559 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 MTMR8Q96EF0 704 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 OTUD5Q96G74 571 aa14□□□□□ -0.17
HDLBP-215ENST00000427487 ZCCHC17Q9NP64 241 aaKnown RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 FRMD4AQ9P2Q2 1039 aaPredicted RBP14□□□□□ -0.17
HDLBP-215ENST00000427487 hCG_1984214I3L0E3 225 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 FMNL1O95466 1100 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 CTDNEP1O95476 244 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 HSP90AA1P07900 732 aaKnown RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 CETPP11597 493 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 RXRAP19793 462 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 HMGCS2P54868 508 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 CCDC96Q2M329 555 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 STAG2Q8N3U4 1231 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 ZNF713Q8N859 430 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 PRPF38AQ8NAV1 312 aaKnown RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 NCOA5Q9HCD5 579 aaKnown RBP13.99□□□□□ -0.17
HDLBP-215ENST00000427487 AGTPBP1Q9UPW5 1226 aa13.99□□□□□ -0.17
HDLBP-215ENST00000427487 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 MANSC4A6NHS7 340 aaPredicted RBP13.98□□□□□ -0.17
HDLBP-215ENST00000427487 RASSF10A6NK89 507 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 DEXIO95424 95 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 SLC10A3P09131 477 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 PDCP20941 246 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 GJA5P36382 358 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
HDLBP-215ENST00000427487 SSRP1Q08945 709 aaKnown RBP13.98□□□□□ -0.17
HDLBP-215ENST00000427487 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 LBX2Q6XYB7 198 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
HDLBP-215ENST00000427487 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms