RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 GOLGB1Q14789 3259 aaKnown RBP24.9■■□□□ 1.58
CNEP1R1-202ENST00000427478 USP17L5A8MUK1 530 aa24.9■■□□□ 1.58
CNEP1R1-202ENST00000427478 BIN1O00499 593 aa24.9■■□□□ 1.58
CNEP1R1-202ENST00000427478 SERPINA10Q9UK55 444 aa24.9■■□□□ 1.58
CNEP1R1-202ENST00000427478 GOLGA6L19H0YKK7 550 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 DPCR1Q3MIW9 517 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 KRBA2Q6ZNG9 492 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 CNNM3Q8NE01 707 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 CCDC148Q8NFR7 591 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 BARHL2Q9NY43 387 aa24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 MORC2Q9Y6X9 1032 aaPredicted RBP24.89■■□□□ 1.58
CNEP1R1-202ENST00000427478 STXBP3O00186 592 aa24.89■■□□□ 1.57
CNEP1R1-202ENST00000427478 CLCN1P35523 988 aa24.89■■□□□ 1.57
CNEP1R1-202ENST00000427478 CCDC93Q567U6 631 aa24.89■■□□□ 1.57
CNEP1R1-202ENST00000427478 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.89■■□□□ 1.57
CNEP1R1-202ENST00000427478 FAM198AQ9UFP1 575 aa24.89■■□□□ 1.57
CNEP1R1-202ENST00000427478 FRMPD2Q68DX3 1309 aaPredicted RBP24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 MPHOSPH10O00566 681 aaKnown RBP24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 BMP15O95972 392 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 PDHBP11177 359 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 PNOCQ13519 176 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 HOMER1Q86YM7 354 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 RASGRP4Q8TDF6 673 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 EHD4Q9H223 541 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 DPEP1P16444 411 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 METTL16Q86W50 562 aaKnown RBP24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 DHX40Q8IX18 779 aaKnown RBP24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 IDI2Q9BXS1 227 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 NAT10Q9H0A0 1025 aaKnown RBP24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 CLIP2Q9UDT6 1046 aa24.88■■□□□ 1.57
CNEP1R1-202ENST00000427478 DDTLA6NHG4 134 aaPredicted RBP24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 BECN2A8MW95 431 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 POLR2DO15514 142 aaKnown RBP24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 TTLL1O95922 423 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 TRAPPC10P48553 1259 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 NLRP12P59046 1061 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 USP49Q70CQ1 688 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 FBXO41Q8TF61 875 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 DNAJC18Q9H819 358 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 ZKSCAN5Q9Y2L8 839 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 KIF13BQ9NQT8 1826 aa24.87■■□□□ 1.57
CNEP1R1-202ENST00000427478 FAM196BA6NMK8 535 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 ZSCAN29Q8IWY8 852 aaPredicted RBP24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 RRP36Q96EU6 259 aaKnown RBP24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 DHX36Q9H2U1 1008 aaKnown RBP24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 VAT1LQ9HCJ6 419 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 PTGDRQ13258 359 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 ISM2Q6H9L7 571 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 AOPEPQ8N6M6 819 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 UBA5Q9GZZ9 404 aa24.86■■□□□ 1.57
CNEP1R1-202ENST00000427478 M0R2N6 131 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 KCNA3P22001 575 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 MCM7P33993 719 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 ATP2C1P98194 919 aaPredicted RBP24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 CFAP100Q494V2 611 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 RTKN2Q8IZC4 609 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 DAGLBQ8NCG7 672 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 SLC16A10Q8TF71 515 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 FERMT2Q96AC1 680 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 TRIM5Q9C035 493 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 TDRD3Q9H7E2 651 aaKnown RBP24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 SEC63Q9UGP8 760 aaKnown RBP24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 TUBE1Q9UJT0 475 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 SH3BP5LQ7L8J4 393 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 PDILTQ8N807 584 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 SPC24Q8NBT2 197 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 PIGSQ96S52 555 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 SERTAD1Q9UHV2 236 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 PCDHA6Q9UN73 950 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 PCDHA8Q9Y5H6 950 aa24.85■■□□□ 1.57
CNEP1R1-202ENST00000427478 COL4A5P29400 1685 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 CCDC194A0A1B0GVG4 234 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 FOXN1O15353 648 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 SMARCA1P28370 1054 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 NAPAP54920 295 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 ATP2B2Q01814 1243 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 GRIPAP1Q4V328 841 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 GALNT17Q6IS24 598 aa24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.84■■□□□ 1.57
CNEP1R1-202ENST00000427478 ASPRV1Q53RT3 343 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 EPSTI1Q96J88 318 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 ZNF277Q9NRM2 450 aaPredicted RBP24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 PI4KBQ9UBF8 816 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 VWA3AA6NCI4 1184 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 SNHG28P0DPA3 235 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 ZNF75DP51815 510 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 PLA2G4DQ86XP0 818 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 PSMD1Q99460 953 aa24.83■■□□□ 1.57
CNEP1R1-202ENST00000427478 LARGE2Q8N3Y3 721 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 CCDC12Q8WUD4 166 aaPredicted RBP24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 SYMPKQ92797 1274 aaKnown RBP24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 CCDC17Q96LX7 622 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 RIOX1Q9H6W3 641 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 GPCPD1Q9NPB8 672 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 PRMT6Q96LA8 375 aaPredicted RBP24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 ZNF830Q96NB3 372 aaPredicted RBP24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 BPIFA3Q9BQP9 254 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 TRIM34Q9BYJ4 488 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 ZMYND12Q9H0C1 365 aa24.82■■□□□ 1.56
CNEP1R1-202ENST00000427478 HOOK1Q9UJC3 728 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms