RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
LINC00458-202ENST00000427299 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
LINC00458-202ENST00000427299 GARTP22102 1010 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 GBP2P32456 591 aaPredicted RBP8.11□□□□□ -1.11
LINC00458-202ENST00000427299 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
LINC00458-202ENST00000427299 FAM160A1Q05DH4 1040 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 MPP2Q14168 576 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 DNAJC14Q6Y2X3 702 aaPredicted RBP8.11□□□□□ -1.11
LINC00458-202ENST00000427299 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 FBXO27Q8NI29 283 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 KCNC2Q96PR1 638 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 KCTD3Q9Y597 815 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 SHROOM4Q9ULL8 1493 aa8.11□□□□□ -1.11
LINC00458-202ENST00000427299 OR14I1A6ND48 311 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 HRKO00198 91 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 RGS13O14921 159 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 USP2O75604 605 aaPredicted RBP8.1□□□□□ -1.11
LINC00458-202ENST00000427299 UBOX5O94941 541 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 BMP7P18075 431 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 SSPNQ14714 243 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 ZNF385BQ569K4 471 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 GOLM1Q8NBJ4 401 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 DAGLBQ8NCG7 672 aa8.1□□□□□ -1.11
LINC00458-202ENST00000427299 GZF1Q9H116 711 aaPredicted RBP8.1□□□□□ -1.11
LINC00458-202ENST00000427299 ASCC2Q9H1I8 757 aaPredicted RBP8.1□□□□□ -1.11
LINC00458-202ENST00000427299 TMEM82A0PJX8 343 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 NRDCO43847 1150 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 RPL10P27635 214 aaKnown RBP8.09□□□□□ -1.11
LINC00458-202ENST00000427299 GBP1P32455 592 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 KIR2DL1P43626 348 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-202ENST00000427299 KIR2DL2P43627 348 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-202ENST00000427299 PWP1Q13610 501 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 ADGRF1Q5T601 910 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 MAP6Q96JE9 813 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 ZCCHC4Q9H5U6 513 aa8.09□□□□□ -1.11
LINC00458-202ENST00000427299 MBD1Q9UIS9 605 aaPredicted RBP8.09□□□□□ -1.11
LINC00458-202ENST00000427299 A0A0G2JLL6 359 aaPredicted RBP8.08□□□□□ -1.12
LINC00458-202ENST00000427299 RFXAPO00287 272 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 RNF4P78317 190 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 WAPLQ7Z5K2 1190 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 ZNF655Q8N720 491 aaPredicted RBP8.08□□□□□ -1.12
LINC00458-202ENST00000427299 RELTQ969Z4 430 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 FOXP3Q9BZS1 431 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 CRTAC1Q9NQ79 661 aa8.08□□□□□ -1.12
LINC00458-202ENST00000427299 SLC22A31A6NKX4 558 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 SORBS3O60504 671 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 TRIM13O60858 407 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 TMC3Q7Z5M5 1100 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 MARCH10Q8NA82 808 aaPredicted RBP8.07□□□□□ -1.12
LINC00458-202ENST00000427299 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 TCTN2Q96GX1 697 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 HHIPL1Q96JK4 782 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 TCFL5Q9UL49 500 aa8.07□□□□□ -1.12
LINC00458-202ENST00000427299 MINDY4BA8MYZ0 360 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 SRSF3P84103 164 aaKnown RBP8.06□□□□□ -1.12
LINC00458-202ENST00000427299 NBPF9Q3BBW0 867 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 BBS9Q3SYG4 887 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 ARSHQ5FYA8 562 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 CEP128Q6ZU80 1094 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 TMEM151BQ8IW70 566 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 SIGLEC10Q96LC7 697 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 LRRC3Q9BY71 257 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 KCNQ5Q9NR82 932 aa8.06□□□□□ -1.12
LINC00458-202ENST00000427299 PI3P19957 117 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 PCBP3P57721 371 aaKnown RBP8.05□□□□□ -1.12
LINC00458-202ENST00000427299 CHMP4BP1P59074 171 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 SNW1Q13573 536 aaKnown RBP8.05□□□□□ -1.12
LINC00458-202ENST00000427299 MLECQ14165 292 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 NBPF12Q5TAG4 269 aaPredicted RBP8.05□□□□□ -1.12
LINC00458-202ENST00000427299 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 PANK1Q8TE04 598 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00458-202ENST00000427299 GMIPQ9P107 970 aa8.05□□□□□ -1.12
LINC00458-202ENST00000427299 TLR3O15455 904 aaKnown RBP8.04□□□□□ -1.12
LINC00458-202ENST00000427299 ATE1O95260 518 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 RAG1P15918 1043 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 EPHB3P54753 998 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 YBX1P67809 324 aaKnown RBP8.04□□□□□ -1.12
LINC00458-202ENST00000427299 SLC14A2Q15849 920 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
LINC00458-202ENST00000427299 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 IRAK3Q9Y616 596 aa8.04□□□□□ -1.12
LINC00458-202ENST00000427299 ABCC9O60706 1549 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 PNLIPP16233 465 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 VIPR1P32241 457 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 TAGLNQ01995 201 aaKnown RBP8.03□□□□□ -1.12
LINC00458-202ENST00000427299 FBXL19Q6PCT2 694 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 ZPBP2Q6X784 338 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 DACT3Q96B18 629 aaPredicted RBP8.03□□□□□ -1.12
LINC00458-202ENST00000427299 PLCD4Q9BRC7 762 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 CNTD2Q9H8S5 307 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 BRMS1Q9HCU9 246 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms