RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 PDE4AP27815 886 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 FAM83BQ5T0W9 1011 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 CWC27Q6UX04 472 aaKnown RBP20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 TRMT44Q8IYL2 757 aaKnown RBP20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 U2AF1L4Q8WU68 220 aaKnown RBP20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 ATG4CQ96DT6 458 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 ZMYM6O95789 1325 aa20.74■□□□□ 0.91
SLC6A1-202ENST00000425938 F5H6K3 240 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 NDUFB10O96000 172 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 KLRC3Q07444 240 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 PLS1Q14651 629 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 MORN1Q5T089 497 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 MKL1Q969V6 931 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 SPATC1LQ9H0A9 340 aa20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 PAK6Q9NQU5 681 aaPredicted RBP20.73■□□□□ 0.91
SLC6A1-202ENST00000425938 SLC15A5A6NIM6 579 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 RANBP6O60518 1105 aaKnown RBP20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 ZKSCAN1P17029 563 aaPredicted RBP20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 MAP2K5Q13163 448 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 SHCBP1Q8NEM2 672 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 APBA2Q99767 749 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 MOV10L1Q9BXT6 1211 aaKnown RBP20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 TOMM22Q9NS69 142 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 PPP1R9AQ9ULJ8 1098 aa20.72■□□□□ 0.91
SLC6A1-202ENST00000425938 ORC4O43929 436 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 PTPREP23469 700 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 UBE2Q1Q7Z7E8 422 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 LRRC47Q8N1G4 583 aaKnown RBP20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 TRIB2Q92519 343 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 USP6NLQ92738 828 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 DEFB118Q96PH6 123 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
SLC6A1-202ENST00000425938 GMCL1P1Q8NEA9 526 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 NUP88Q99567 741 aaPredicted RBP20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 MROH8Q9H579 483 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 INCENPQ9NQS7 918 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 ADAMTS5Q9UNA0 930 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 STX8Q9UNK0 236 aa20.7■□□□□ 0.9
SLC6A1-202ENST00000425938 ZNFX1Q9P2E3 1918 aaKnown RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 STRNO43815 780 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 TFRCP02786 760 aaKnown RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 FGRP09769 529 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 PCP11498 1178 aaKnown RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 GSPT1P15170 499 aaKnown RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 ERCC3P19447 782 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 HAND2P61296 217 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 GRB14Q14449 540 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 RRP12Q5JTH9 1297 aaKnown RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 SLFN13Q68D06 897 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 NCAPG2Q86XI2 1143 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 CRISPLD2Q9H0B8 497 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 HMX1Q9NP08 348 aaPredicted RBP20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 RPTORQ8N122 1335 aa20.69■□□□□ 0.9
SLC6A1-202ENST00000425938 VWA5AO00534 786 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 FARP2O94887 1054 aaPredicted RBP20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 SLC25A27O95847 323 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 TMEM132BQ14DG7 1078 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 PRPF38AQ8NAV1 312 aaKnown RBP20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 HTATIP2Q9BUP3 242 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 ISY1Q9ULR0 285 aaKnown RBP20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 LAMA4Q16363 1823 aa20.68■□□□□ 0.9
SLC6A1-202ENST00000425938 ZNF236Q9UL36 1845 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 ZNF213O14771 459 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 SLC34A2O95436 690 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 PRKAR2AP13861 404 aaKnown RBP20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 COPB2P35606 906 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 TRIM32Q13049 653 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 DPP9Q86TI2 863 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 FEM1BQ9UK73 627 aa20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 CTDP1Q9Y5B0 961 aaPredicted RBP20.67■□□□□ 0.9
SLC6A1-202ENST00000425938 HOXC6P09630 235 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 BMP3P12645 472 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 STAT3P40763 770 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 CCL14Q16627 93 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 MAP3K21Q5TCX8 1036 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 STAG1Q8WVM7 1258 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 RUFY2Q8WXA3 655 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 DPF3Q92784 378 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 DSCC1Q9BVC3 393 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 IL17RBQ9NRM6 502 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 SLC5A4Q9NY91 659 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
SLC6A1-202ENST00000425938 RAD50Q92878 1312 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 NMT2O60551 498 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 ZBED4O75132 1171 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 FCER1AP12319 257 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 ADORA2AP29274 412 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 SLC1A4P43007 532 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 MFSD14CQ5VZR4 134 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 RIOX2Q8IUF8 465 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 ABRAQ8N0Z2 381 aa20.65■□□□□ 0.9
SLC6A1-202ENST00000425938 KIFC2Q96AC6 838 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms