RNA–Protein interactions for RNA: ENST00000425872.1

HMGN2P17-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 17, humanhuman

BASIC

Gene HMGN2P17, Length 743 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P17-201ENST00000425872 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 SRRDQ9UH36 339 aa13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 HERC5Q9UII4 1024 aaKnown RBP13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
HMGN2P17-201ENST00000425872 KLF18A0A0U1RQI7 1052 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 ERICH2A1L162 156 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 FAM196BA6NMK8 535 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 NMT2O60551 498 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 PFKFB2O60825 505 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TSPY3P0CV98 308 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TSPY8P0CW00 308 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 PDIA3P30101 505 aaKnown RBP13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 PSMC4P43686 418 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 WTAPQ15007 396 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 SGMS1Q86VZ5 419 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 PNMA3Q9UL41 463 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TNKSO95271 1327 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 MYPNQ86TC9 1320 aa13.06□□□□□ -0.32
HMGN2P17-201ENST00000425872 TRIM75PA6NK02 468 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 HSP90AA1P07900 732 aaKnown RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 AKR1B1P15121 316 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 FCGRTP55899 365 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 STK3Q13188 491 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 CCDC178Q5BJE1 867 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 INTS4Q96HW7 963 aaKnown RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
HMGN2P17-201ENST00000425872 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 CCDC69A6NI79 296 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 CYP2C8P10632 490 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 OSBPP22059 807 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 RCSD1Q6JBY9 416 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 SH3TC2Q8TF17 1288 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
HMGN2P17-201ENST00000425872 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 CTGFP29279 349 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 CAP2P40123 477 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 SCRN1Q12765 414 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 RRP1BQ14684 758 aaKnown RBP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 APOA5Q6Q788 366 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 RAB11FIP4Q86YS3 637 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 ZNF280CQ8ND82 737 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 GTF3C6Q969F1 213 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 SLC12A7Q9Y666 1083 aa13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
HMGN2P17-201ENST00000425872 PARP14Q460N5 1801 aa13.02□□□□□ -0.32
HMGN2P17-201ENST00000425872 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 USP17L5A8MUK1 530 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 ZBTB43O43298 467 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 ASNSP08243 561 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 GRK4P32298 578 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 NOVP48745 357 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 FAM110CQ1W6H9 321 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 MYL10Q9BUA6 226 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 NCOA5Q9HCD5 579 aaKnown RBP13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.33
HMGN2P17-201ENST00000425872 MPHOSPH10O00566 681 aaKnown RBP13.01□□□□□ -0.33
HMGN2P17-201ENST00000425872 RXRAP19793 462 aa13.01□□□□□ -0.33
HMGN2P17-201ENST00000425872 GUCY1A2P33402 732 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms