RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 COG2Q14746 738 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 WTAPQ15007 396 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 RASGRP2Q7LDG7 609 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 PNMA1Q8ND90 353 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 TMEM87BQ96K49 555 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 CPA4Q9UI42 421 aa28.72■■■□□ 2.19
VEGFA-209ENST00000425836 GPR25O00155 361 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 LRRC2Q9BYS8 371 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 FLOT1O75955 427 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 CPA1P15085 419 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 PSMA5P28066 241 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 NOM1Q5C9Z4 860 aaKnown RBP28.71■■■□□ 2.19
VEGFA-209ENST00000425836 POTEEQ6S8J3 1075 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 DCAF4Q8WV16 495 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 LY9Q9HBG7 655 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 FBXO28Q9NVF7 368 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 HOXC10Q9NYD6 342 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 WDR19Q8NEZ3 1342 aa28.71■■■□□ 2.19
VEGFA-209ENST00000425836 SH2B2O14492 632 aaPredicted RBP28.7■■■□□ 2.18
VEGFA-209ENST00000425836 PDHBP11177 359 aa28.7■■■□□ 2.18
VEGFA-209ENST00000425836 TCEANC2Q96MN5 208 aa28.7■■■□□ 2.18
VEGFA-209ENST00000425836 SPDYE16A6NNV3 312 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-209ENST00000425836 SNHG28P0DPA3 235 aa28.69■■■□□ 2.18
VEGFA-209ENST00000425836 BCRP11274 1271 aa28.69■■■□□ 2.18
VEGFA-209ENST00000425836 DSG3P32926 999 aa28.69■■■□□ 2.18
VEGFA-209ENST00000425836 GCLCP48506 637 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-209ENST00000425836 LBX1P52954 281 aa28.69■■■□□ 2.18
VEGFA-209ENST00000425836 BLOC1S2Q6QNY1 142 aa28.69■■■□□ 2.18
VEGFA-209ENST00000425836 ANAPC15P60006 121 aa28.68■■■□□ 2.18
VEGFA-209ENST00000425836 LBX2Q6XYB7 198 aa28.68■■■□□ 2.18
VEGFA-209ENST00000425836 KCTD1Q719H9 257 aa28.68■■■□□ 2.18
VEGFA-209ENST00000425836 MYH4Q9Y623 1939 aa28.68■■■□□ 2.18
VEGFA-209ENST00000425836 CASTP20810 708 aaKnown RBP28.67■■■□□ 2.18
VEGFA-209ENST00000425836 ANKRD13CQ8N6S4 541 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 GTF3C2Q8WUA4 911 aaPredicted RBP28.67■■■□□ 2.18
VEGFA-209ENST00000425836 ZNF296Q8WUU4 475 aaPredicted RBP28.67■■■□□ 2.18
VEGFA-209ENST00000425836 TM6SF1Q9BZW5 370 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 ZSWIM6Q9HCJ5 1215 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 RBPJLQ9UBG7 517 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 FEM1BQ9UK73 627 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 ISY1Q9ULR0 285 aaKnown RBP28.67■■■□□ 2.18
VEGFA-209ENST00000425836 TMEM232C9JQI7 657 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 RPS6KB1P23443 525 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 LIFRP42702 1097 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 CCDC96Q2M329 555 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 SAMD1Q6SPF0 538 aaPredicted RBP28.67■■■□□ 2.18
VEGFA-209ENST00000425836 TMTC2Q8N394 836 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 ATG4CQ96DT6 458 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 TXNRD2Q9NNW7 524 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 PPP1R9AQ9ULJ8 1098 aa28.67■■■□□ 2.18
VEGFA-209ENST00000425836 MYPNQ86TC9 1320 aa28.66■■■□□ 2.18
VEGFA-209ENST00000425836 PEX10O60683 326 aa28.66■■■□□ 2.18
VEGFA-209ENST00000425836 SLF1Q9BQI6 1058 aa28.66■■■□□ 2.18
VEGFA-209ENST00000425836 FRMPD2Q68DX3 1309 aaPredicted RBP28.65■■■□□ 2.18
VEGFA-209ENST00000425836 SP3Q02447 781 aa28.65■■■□□ 2.18
VEGFA-209ENST00000425836 ZNF543Q08ER8 600 aa28.65■■■□□ 2.18
VEGFA-209ENST00000425836 IL17RAQ96F46 866 aa28.65■■■□□ 2.18
VEGFA-209ENST00000425836 ADAMTS5Q9UNA0 930 aa28.65■■■□□ 2.18
VEGFA-209ENST00000425836 PLA2G6O60733 806 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 FKTNO75072 461 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 FAM110CQ1W6H9 321 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 TTBK2Q6IQ55 1244 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 RUFY3Q7L099 469 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 PRPF38AQ8NAV1 312 aaKnown RBP28.64■■■□□ 2.18
VEGFA-209ENST00000425836 GPCPD1Q9NPB8 672 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 MORF4L1Q9UBU8 362 aa28.64■■■□□ 2.18
VEGFA-209ENST00000425836 CNMDO75829 334 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 STAT2P52630 851 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 TROAPQ12815 778 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 NFXL1Q6ZNB6 911 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 CATIPQ7Z7H3 387 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 FAM160B2Q86V87 743 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 CHURC1Q8WUH1 139 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 KIFC2Q96AC6 838 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 PAGR1Q9BTK6 254 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 BACH2Q9BYV9 841 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 RABGAP1Q9Y3P9 1069 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 CYP46A1Q9Y6A2 500 aa28.63■■■□□ 2.17
VEGFA-209ENST00000425836 GOLGA8HP0CJ92 632 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 Q3C1V9 767 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 SGMS1Q86VZ5 419 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 UPF3BQ9BZI7 483 aaKnown RBP28.62■■■□□ 2.17
VEGFA-209ENST00000425836 BTBD7Q9P203 1132 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 CCDC69A6NI79 296 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 VWA5AO00534 786 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 IKQ13123 557 aaPredicted RBP28.62■■■□□ 2.17
VEGFA-209ENST00000425836 BTNL9Q6UXG8 535 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 Q6ZUG5 572 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 ZNF654Q8IZM8 581 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 GPRC5AQ8NFJ5 357 aa28.62■■■□□ 2.17
VEGFA-209ENST00000425836 GPATCH4Q5T3I0 446 aaKnown RBP28.61■■■□□ 2.17
VEGFA-209ENST00000425836 MB21D1Q8N884 522 aa28.61■■■□□ 2.17
VEGFA-209ENST00000425836 C22orf23Q9BZE7 217 aa28.61■■■□□ 2.17
VEGFA-209ENST00000425836 PARP1P09874 1014 aaKnown RBP28.6■■■□□ 2.17
VEGFA-209ENST00000425836 SLC16A2P36021 539 aa28.6■■■□□ 2.17
VEGFA-209ENST00000425836 ERVK-9P63128 1117 aa28.6■■■□□ 2.17
VEGFA-209ENST00000425836 ERVK-24P63145 666 aa28.6■■■□□ 2.17
VEGFA-209ENST00000425836 LACTBP83111 547 aaPredicted RBP28.6■■■□□ 2.17
VEGFA-209ENST00000425836 FGD1P98174 961 aa28.6■■■□□ 2.17
VEGFA-209ENST00000425836 ASPRV1Q53RT3 343 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms