RNA–Protein interactions for RNA: ENST00000425712.1

LINC01006-203, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 661 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-203ENST00000425712 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
LINC01006-203ENST00000425712 IRF6O14896 467 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 LARGE1O95461 756 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 VCAM1P19320 739 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 RXRAP19793 462 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 ZNF157P51786 506 aaPredicted RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 GTF2A2P52657 109 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 HMGCS2P54868 508 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 ZNF543Q08ER8 600 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 SCRN1Q12765 414 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 TMTC3Q6ZXV5 915 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 FASTKD5Q7L8L6 764 aaKnown RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 RAB11FIP4Q86YS3 637 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 RASAL3Q86YV0 1011 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 CNKSR2Q8WXI2 1034 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 LLPHQ9BRT6 129 aaKnown RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 ISY1Q9ULR0 285 aaKnown RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
LINC01006-203ENST00000425712 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.01□□□□□ -0.65
LINC01006-203ENST00000425712 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
LINC01006-203ENST00000425712 PLA2G6O60733 806 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 HSP90AA1P07900 732 aaKnown RBP11□□□□□ -0.65
LINC01006-203ENST00000425712 SLC10A3P09131 477 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 CETPP11597 493 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 SMARCA1P28370 1054 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 STAT2P52630 851 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
LINC01006-203ENST00000425712 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01006-203ENST00000425712 CUL4AQ13619 759 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 SPRYD7Q5W111 196 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 FAM160B2Q86V87 743 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 CCDC83Q8IWF9 413 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 CCDC144CPQ8IYA2 1237 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 SPICE1Q8N0Z3 855 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 CCDC102AQ96A19 550 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
LINC01006-203ENST00000425712 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 DAXXQ9UER7 740 aaPredicted RBP11□□□□□ -0.65
LINC01006-203ENST00000425712 MAD2L2Q9UI95 211 aa11□□□□□ -0.65
LINC01006-203ENST00000425712 MANSC4A6NHS7 340 aaPredicted RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 RASSF10A6NK89 507 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 IFNAR1P17181 557 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 CDC27P30260 824 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 GJA5P36382 358 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 HMGN5P82970 282 aaKnown RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 IKQ13123 557 aaPredicted RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 FAM83BQ5T0W9 1011 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 GADL1Q6ZQY3 521 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 TRIM22Q8IYM9 498 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 NECAB1Q8N987 351 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 CHURC1Q8WUH1 139 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 RNF26Q9BY78 433 aaPredicted RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 TANGO6Q9C0B7 1094 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 RPAP3Q9H6T3 665 aaPredicted RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 FEM1BQ9UK73 627 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 AGTPBP1Q9UPW5 1226 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 KIF3AQ9Y496 699 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 FRMPD2Q68DX3 1309 aaPredicted RBP10.99□□□□□ -0.65
LINC01006-203ENST00000425712 MYPNQ86TC9 1320 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 STK36Q9NRP7 1315 aa10.99□□□□□ -0.65
LINC01006-203ENST00000425712 CCL15-CCL14A0A0B4J2E2 113 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 PLEKHA8P1O95397 391 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 GOLGA8HP0CJ92 632 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 FDX1P10109 184 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 AKAP17AQ02040 695 aaKnown RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 ST3GAL1Q11201 340 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 SREBF2Q12772 1141 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 CCL15Q16663 113 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 BTNL9Q6UXG8 535 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 NSUN7Q8NE18 718 aaKnown RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 NUP88Q99567 741 aaPredicted RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
LINC01006-203ENST00000425712 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
LINC01006-203ENST00000425712 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
LINC01006-203ENST00000425712 FLOT1O75955 427 aa10.97□□□□□ -0.65
LINC01006-203ENST00000425712 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms