RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 G6PC3Q9BUM1 346 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 GCM1Q9NP62 436 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 ZMYM5Q9UJ78 669 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 SSU72P8A0A1W2PR75 194 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 SLC22A31A6NKX4 558 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 RNF4P78317 190 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 SLC14A2Q15849 920 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 FAM196AQ6ZSG2 479 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 SIRT2Q8IXJ6 389 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 FBXO27Q8NI29 283 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 SGPP1Q9BX95 441 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.85□□□□□ -0.99
LINC01040-201ENST00000425048 VTI1BQ9UEU0 232 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 ROBO2Q9HCK4 1378 aa8.85□□□□□ -0.99
LINC01040-201ENST00000425048 RAG1P15918 1043 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 HOXA5P20719 270 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 GALK1P51570 392 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 CWF19L2Q2TBE0 894 aaKnown RBP8.84□□□□□ -0.99
LINC01040-201ENST00000425048 WAPLQ7Z5K2 1190 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 NLRX1Q86UT6 975 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 ZNF655Q8N720 491 aaPredicted RBP8.84□□□□□ -0.99
LINC01040-201ENST00000425048 HDAC8Q9BY41 377 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 PARD6AQ9NPB6 346 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 KCTD3Q9Y597 815 aa8.84□□□□□ -0.99
LINC01040-201ENST00000425048 NOTOA8MTQ0 251 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 BMP7P18075 431 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 GARTP22102 1010 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 KIR2DL1P43626 348 aaPredicted RBP8.83□□□□□ -1
LINC01040-201ENST00000425048 KIR2DL2P43627 348 aaPredicted RBP8.83□□□□□ -1
LINC01040-201ENST00000425048 PCBP3P57721 371 aaKnown RBP8.83□□□□□ -1
LINC01040-201ENST00000425048 ARSHQ5FYA8 562 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 ADGRF1Q5T601 910 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 TCERG1LQ5VWI1 586 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 TCTN2Q96GX1 697 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 KRTAP4-11Q9BYQ6 195 aa8.83□□□□□ -1
LINC01040-201ENST00000425048 RFXAPO00287 272 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 TLR3O15455 904 aaKnown RBP8.82□□□□□ -1
LINC01040-201ENST00000425048 NRDCO43847 1150 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 UBOX5O94941 541 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 TMEM151BQ8IW70 566 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 LINC00116Q8NCU8 138 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 FOXP3Q9BZS1 431 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 ZCCHC4Q9H5U6 513 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 CRTAC1Q9NQ79 661 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 TCFL5Q9UL49 500 aa8.82□□□□□ -1
LINC01040-201ENST00000425048 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
LINC01040-201ENST00000425048 RAD51AP2Q09MP3 1159 aa8.81□□□□□ -1
LINC01040-201ENST00000425048 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
LINC01040-201ENST00000425048 MAP6Q96JE9 813 aa8.81□□□□□ -1
LINC01040-201ENST00000425048 C20orf173Q96LM9 149 aa8.81□□□□□ -1
LINC01040-201ENST00000425048 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
LINC01040-201ENST00000425048 PCDHB14Q9Y5E9 798 aa8.81□□□□□ -1
LINC01040-201ENST00000425048 HRKO00198 91 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 USP2O75604 605 aaPredicted RBP8.8□□□□□ -1
LINC01040-201ENST00000425048 ATE1O95260 518 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 FBXL19Q6PCT2 694 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 CEP128Q6ZU80 1094 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 TMC3Q7Z5M5 1100 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 RELTQ969Z4 430 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 BRMS1Q9HCU9 246 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 KBTBD4Q9NVX7 518 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 GMIPQ9P107 970 aa8.8□□□□□ -1
LINC01040-201ENST00000425048 BUD31P41223 144 aaPredicted RBP8.79□□□□□ -1
LINC01040-201ENST00000425048 TAGLNQ01995 201 aaKnown RBP8.79□□□□□ -1
LINC01040-201ENST00000425048 LRRC3Q9BY71 257 aa8.79□□□□□ -1
LINC01040-201ENST00000425048 SUPT16HQ9Y5B9 1047 aaKnown RBP8.79□□□□□ -1
LINC01040-201ENST00000425048 SYPP08247 313 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 PNLIPP16233 465 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 EIF4A3P38919 411 aaKnown RBP8.78□□□□□ -1
LINC01040-201ENST00000425048 CDCP2Q5VXM1 449 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 HHIPL1Q96JK4 782 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 SIGLEC10Q96LC7 697 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 KCNQ5Q9NR82 932 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 MBD1Q9UIS9 605 aaPredicted RBP8.78□□□□□ -1
LINC01040-201ENST00000425048 IRAK3Q9Y616 596 aa8.78□□□□□ -1
LINC01040-201ENST00000425048 TMEM82A0PJX8 343 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 GREM1O60565 184 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 EFEMP2O95967 443 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 ERCC3P19447 782 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 SSPNQ14714 243 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 LCE5AQ5TCM9 118 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 ERMP1Q7Z2K6 904 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 MARCH10Q8NA82 808 aaPredicted RBP8.77□□□□□ -1.01
LINC01040-201ENST00000425048 COPRSQ9NQ92 184 aa8.77□□□□□ -1.01
LINC01040-201ENST00000425048 FKTNO75072 461 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 RTP1P59025 263 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 SNW1Q13573 536 aaKnown RBP8.76□□□□□ -1.01
LINC01040-201ENST00000425048 KCNC2Q96PR1 638 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 CNNM2Q9H8M5 875 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 EHMT1Q9H9B1 1298 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 TNFRSF10DQ9UBN6 386 aa8.76□□□□□ -1.01
LINC01040-201ENST00000425048 ABLIM1O14639 778 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 SIGLEC6O43699 453 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 CLEC3AO75596 197 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 PRAMEF1O95521 474 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 CCNFP41002 786 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 YBX1P67809 324 aaKnown RBP8.75□□□□□ -1.01
LINC01040-201ENST00000425048 BBS9Q3SYG4 887 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms