RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ARVCFO00192 962 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 KDM4AO75164 1064 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 ASGR1P07306 291 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 LDHCP07864 332 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 VCAM1P19320 739 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 TAP1Q03518 808 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 ATP2B3Q16720 1220 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 BEND3Q5T5X7 828 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 IER5LQ5T953 404 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 ATF7IPQ6VMQ6 1270 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 CATSPERGQ6ZRH7 1159 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-203ENST00000424270 CCER1Q8TC90 406 aaPredicted RBP7.83□□□□□ -1.16
SDCBP-203ENST00000424270 MMP19Q99542 508 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 SPATC1LQ9H0A9 340 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 DHX36Q9H2U1 1008 aaKnown RBP7.83□□□□□ -1.16
SDCBP-203ENST00000424270 MROH8Q9H579 483 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
SDCBP-203ENST00000424270 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 MYH13Q9UKX3 1938 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 GRXCR2A6NFK2 248 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 SPDYE16A6NNV3 312 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-203ENST00000424270 H3BQ06 376 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-203ENST00000424270 SEMA3EO15041 775 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 ADAMTS4O75173 837 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 GH2P01242 217 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 HLA-DOAP06340 250 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 PGK2P07205 417 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 TAL1P17542 331 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-203ENST00000424270 MECOMQ03112 1051 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 KCTD2Q14681 263 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 PKN1Q16512 942 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 SHROOM1Q2M3G4 852 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-203ENST00000424270 GNASQ5JWF2 1037 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 NOL8Q76FK4 1167 aaKnown RBP7.82□□□□□ -1.16
SDCBP-203ENST00000424270 FAM126BQ8IXS8 530 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 VGLL2Q8N8G2 317 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 GBF1Q92538 1859 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 SCLYQ96I15 445 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 SLC9A7Q96T83 725 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 TINF2Q9BSI4 451 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 FTOQ9C0B1 505 aaKnown RBP eCLIP7.82□□□□□ -1.165e-6■□□□□ 9.5
SDCBP-203ENST00000424270 SRCIN1Q9C0H9 1055 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 GINM1Q9NU53 330 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 RAI14Q9P0K7 980 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 MUTYHQ9UIF7 546 aa7.82□□□□□ -1.16
SDCBP-203ENST00000424270 UMODL1Q5DID0 1318 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 GPR75-ASB3A0A0A6YYF3 556 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 POTEB3A0JP26 581 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 APAF1O14727 1248 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 GABBR2O75899 941 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 FGFR2P21802 821 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 PHKA1P46020 1223 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 KCNJ6P48051 423 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 JAG1P78504 1218 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 COG2Q14746 738 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 POTEBQ6S5H4 581 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 SHCBP1Q8NEM2 672 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 HOXC10Q9NYD6 342 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 SAP30BPQ9UHR5 308 aaKnown RBP7.81□□□□□ -1.16
SDCBP-203ENST00000424270 CHD9Q3L8U1 2897 aa7.81□□□□□ -1.16
SDCBP-203ENST00000424270 PRRC2BQ5JSZ5 2229 aaKnown RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 MYADML2A6NDP7 307 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 TMEM221A6NGB7 291 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 H0Y858 1186 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 M0R296 226 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 ALDH1L1O75891 902 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 MAP4K4O95819 1239 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 PFKMP08237 780 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 CDK7P50613 346 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 RHBDL3P58872 404 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 TCF15Q12870 199 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 FOXP4Q8IVH2 680 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 HERC6Q8IVU3 1022 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 MAPKAPK5Q8IW41 473 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 ABRAQ8N0Z2 381 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 SH3RF3Q8TEJ3 882 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 FAM163AQ96GL9 167 aaPredicted RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 C12orf42Q96LP6 360 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 POP1Q99575 1024 aaKnown RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 SIL1Q9H173 461 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 CABP5Q9NP86 173 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
SDCBP-203ENST00000424270 TLR9Q9NR96 1032 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 LMCD1Q9NZU5 365 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 CEP126Q9P2H0 1117 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 TRPC6Q9Y210 931 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 MYH2Q9UKX2 1941 aa7.8□□□□□ -1.16
SDCBP-203ENST00000424270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-203ENST00000424270 EYA2O00167 538 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 FLOT1O75955 427 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 BAG3O95817 575 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 IGHA2P01877 340 aa7.79□□□□□ -1.16
SDCBP-203ENST00000424270 NBPF7P0C2Y1 421 aaPredicted RBP7.79□□□□□ -1.16
SDCBP-203ENST00000424270 ZNF865P0CJ78 1059 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms