RNA–Protein interactions for RNA: ENST00000424263.6

PRDM11-201, Transcript of PR/SET domain 11, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PRDM11, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-201ENST00000424263 DCAF4Q8WV16 495 aa23.29■■□□□ 1.32
PRDM11-201ENST00000424263 NUP88Q99567 741 aaPredicted RBP23.29■■□□□ 1.32
PRDM11-201ENST00000424263 WDR33Q9C0J8 1336 aaKnown RBP23.29■■□□□ 1.32
PRDM11-201ENST00000424263 NID2Q14112 1375 aa23.29■■□□□ 1.32
PRDM11-201ENST00000424263 GPAT2Q6NUI2 795 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 AGTPBP1Q9UPW5 1226 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 AOC2O75106 756 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 RCAN1P53805 252 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 FAM83BQ5T0W9 1011 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 MICU3Q86XE3 530 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 SNX21Q969T3 373 aa23.28■■□□□ 1.32
PRDM11-201ENST00000424263 LARP6Q9BRS8 491 aaKnown RBP23.28■■□□□ 1.32
PRDM11-201ENST00000424263 ST18O60284 1047 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 SLC1A4P43007 532 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 KIF23Q02241 960 aaPredicted RBP23.27■■□□□ 1.32
PRDM11-201ENST00000424263 GRM4Q14833 912 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 RAB11FIP4Q86YS3 637 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 CHMP4CQ96CF2 233 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 MAP3K14Q99558 947 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 PTPN18Q99952 460 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 RPAP3Q9H6T3 665 aaPredicted RBP23.27■■□□□ 1.32
PRDM11-201ENST00000424263 TPCN1Q9ULQ1 816 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 HPS5Q9UPZ3 1129 aa23.27■■□□□ 1.32
PRDM11-201ENST00000424263 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 ZBTB43O43298 467 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 CD2BP2O95400 341 aaKnown RBP23.26■■□□□ 1.31
PRDM11-201ENST00000424263 BMP3P12645 472 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 RXRAP19793 462 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 ZNF543Q08ER8 600 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 BTBD19C9JJ37 291 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 CALM1P0DP23 149 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 CALM2P0DP24 149 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 CALM3P0DP25 149 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 SREBF2Q12772 1141 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 NUP133Q8WUM0 1156 aa23.26■■□□□ 1.31
PRDM11-201ENST00000424263 INHBEP58166 350 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 CCDC96Q2M329 555 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 KCTD1Q719H9 257 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 NOL8Q76FK4 1167 aaKnown RBP23.25■■□□□ 1.31
PRDM11-201ENST00000424263 ANKRD23Q86SG2 305 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 ZNF274Q96GC6 653 aaPredicted RBP23.25■■□□□ 1.31
PRDM11-201ENST00000424263 MAD2L2Q9UI95 211 aa23.25■■□□□ 1.31
PRDM11-201ENST00000424263 FRMPD2Q68DX3 1309 aaPredicted RBP23.25■■□□□ 1.31
PRDM11-201ENST00000424263 IGF2BP3O00425 579 aaKnown RBP eCLIP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 PARP1P09874 1014 aaKnown RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 PDIA3P30101 505 aaKnown RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 HOXA7P31268 230 aaPredicted RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 FAM43AQ8N2R8 423 aa23.24■■□□□ 1.31
PRDM11-201ENST00000424263 TANGO6Q9C0B7 1094 aa23.24■■□□□ 1.31
PRDM11-201ENST00000424263 SLC45A1Q9Y2W3 748 aa23.24■■□□□ 1.31
PRDM11-201ENST00000424263 PALM3A6NDB9 673 aaPredicted RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 TM4SF4P48230 202 aa23.24■■□□□ 1.31
PRDM11-201ENST00000424263 GPATCH4Q5T3I0 446 aaKnown RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
PRDM11-201ENST00000424263 NAP1L2Q9ULW6 460 aaPredicted RBP23.24■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L15C9J2P7 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L13C9JLJ4 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L11C9JVI0 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L18D6R9N7 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L22D6RA61 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L17D6RBQ6 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L19D6RCP7 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L20D6RJB6 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 LARGE1O95461 756 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 GOLGA8HP0CJ92 632 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 MAP2K2P36507 400 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 USP17L24Q0WX57 530 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 CATSPERGQ6ZRH7 1159 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 STAG2Q8N3U4 1231 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 FANCBQ8NB91 859 aa23.23■■□□□ 1.31
PRDM11-201ENST00000424263 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
PRDM11-201ENST00000424263 GOLGA8AA7E2F4 631 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 METAP2P50579 478 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 IFNL1Q8IU54 200 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 ZCCHC17Q9NP64 241 aaKnown RBP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 LIMCH1Q9UPQ0 1083 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 PDHXO00330 501 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 PLA2G6O60733 806 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 PABPC4Q13310 644 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 ME3Q16798 604 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 RTN1Q16799 776 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 TTBK2Q6IQ55 1244 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 REM2Q8IYK8 340 aaPredicted RBP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 GPCPD1Q9NPB8 672 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 FAM217BQ9NTX9 383 aaPredicted RBP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 FBXO28Q9NVF7 368 aa23.22■■□□□ 1.31
PRDM11-201ENST00000424263 ISY1Q9ULR0 285 aaKnown RBP23.22■■□□□ 1.31
PRDM11-201ENST00000424263 TMEM232C9JQI7 657 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 KIF5BP33176 963 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 STAT2P52630 851 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 BTNL9Q6UXG8 535 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 ASCC2Q9H1I8 757 aaPredicted RBP23.21■■□□□ 1.31
PRDM11-201ENST00000424263 FEM1BQ9UK73 627 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
PRDM11-201ENST00000424263 FLOT1O75955 427 aa23.2■■□□□ 1.3
PRDM11-201ENST00000424263 CDC27P30260 824 aa23.2■■□□□ 1.3
PRDM11-201ENST00000424263 MCM2P49736 904 aa23.2■■□□□ 1.3
PRDM11-201ENST00000424263 RBM28Q9NW13 759 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms