RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 KCNJ18B7U540 433 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 ORC4O43929 436 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 GPTP24298 496 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 USP14P54578 494 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 STX17P56962 302 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 CKAP4Q07065 602 aaKnown RBP17.16■□□□□ 0.34
C9orf3-204ENST00000424143 KCNJ12Q14500 433 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 HSP90B2PQ58FF3 399 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 RRAGBQ5VZM2 374 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 KLHL10Q6JEL2 608 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 ENAHQ8N8S7 591 aaPredicted RBP17.16■□□□□ 0.34
C9orf3-204ENST00000424143 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
C9orf3-204ENST00000424143 NUP58Q9BVL2 599 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 THAP9Q9H5L6 903 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 CAPN11Q9UMQ6 739 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 CTNND2Q9UQB3 1225 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 MYH13Q9UKX3 1938 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 NDUFA10O95299 355 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 KRT9P35527 623 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 PPP1R2P41236 205 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 LMAN1P49257 510 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 VSNL1P62760 191 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 KRT83P78385 493 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 CDK17Q00537 523 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 PTGDRQ13258 359 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 MEA1Q16626 185 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
C9orf3-204ENST00000424143 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CALML3P27482 149 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 ITIH3Q06033 890 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 EARS2Q5JPH6 523 aaKnown RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 IFIT1BQ5T764 474 aaKnown RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 ACRBPQ8NEB7 543 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 NELFBQ8WX92 580 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 ZKSCAN3Q9BRR0 538 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 MAGEF1Q9HAY2 307 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CNTNAP5Q8WYK1 1306 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 RPN1P04843 607 aaKnown RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CTR9Q6PD62 1173 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 SRLQ86TD4 932 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 CCDC170Q8IYT3 715 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 ADSSL1Q8N142 457 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 RIOK1Q9BRS2 568 aaKnown RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 RASSF4Q9H2L5 321 aa17.14■□□□□ 0.33
C9orf3-204ENST00000424143 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
C9orf3-204ENST00000424143 PDS5AQ29RF7 1337 aaKnown RBP17.13■□□□□ 0.33
C9orf3-204ENST00000424143 CYP7A1P22680 504 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 DNM2P50570 870 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 MCM6Q14566 821 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
C9orf3-204ENST00000424143 FIGNQ5HY92 759 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 WWC2Q6AWC2 1192 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 C4orf32Q8N8J7 132 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 VPS18Q9P253 973 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
C9orf3-204ENST00000424143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
C9orf3-204ENST00000424143 REXO2Q9Y3B8 237 aaKnown RBP17.13■□□□□ 0.33
C9orf3-204ENST00000424143 CICQ96RK0 1608 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 MYO1CO00159 1063 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 ATP2B1P20020 1258 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 ZNF174Q15697 407 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 COBLL1Q53SF7 1204 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 GALNT17Q6IS24 598 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 DZIP3Q86Y13 1208 aaKnown RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 IRF2BP1Q8IU81 584 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 DHTKD1Q96HY7 919 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 MTRQ99707 1265 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-204ENST00000424143 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
C9orf3-204ENST00000424143 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 LAD1O00515 517 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 CLSTN1O94985 981 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 PARP1P09874 1014 aaKnown RBP17.11■□□□□ 0.33
C9orf3-204ENST00000424143 SCG2P13521 617 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 PFKFB3Q16875 520 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-204ENST00000424143 IQCEQ6IPM2 695 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
C9orf3-204ENST00000424143 BBXQ8WY36 941 aaPredicted RBP17.11■□□□□ 0.33
C9orf3-204ENST00000424143 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms