RNA–Protein interactions for RNA: ENST00000424062.1

POLR1B-205, Transcript of RNA polymerase I subunit B, humanhuman

TSL 4

Gene POLR1B, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-205ENST00000424062 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 SNHG28P0DPA3 235 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 SMARCA1P28370 1054 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 CDC27P30260 824 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
POLR1B-205ENST00000424062 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
POLR1B-205ENST00000424062 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 CHURC1Q8WUH1 139 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.2
POLR1B-205ENST00000424062 WNK4Q96J92 1243 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
POLR1B-205ENST00000424062 MAD2L2Q9UI95 211 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
POLR1B-205ENST00000424062 NID2Q14112 1375 aa13.83□□□□□ -0.2
POLR1B-205ENST00000424062 IRF6O14896 467 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
POLR1B-205ENST00000424062 GOLGA8HP0CJ92 632 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 HMGCS2P54868 508 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SSRP1Q08945 709 aaKnown RBP13.82□□□□□ -0.2
POLR1B-205ENST00000424062 IKQ13123 557 aaPredicted RBP13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SNAPC2Q13487 334 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SH3D19Q5HYK7 790 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 RGMBQ6NW40 437 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 KCTD1Q719H9 257 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 FASTKD5Q7L8L6 764 aaKnown RBP13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 FEM1BQ9UK73 627 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 KCNH4Q9UQ05 1017 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 TLL2Q9Y6L7 1015 aa13.82□□□□□ -0.2
POLR1B-205ENST00000424062 TMEM232C9JQI7 657 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 IFNAR1P17181 557 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 GTF2A2P52657 109 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 KIAA1755Q5JYT7 1200 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 GADL1Q6ZQY3 521 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 TMTC3Q6ZXV5 915 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 FAM160B2Q86V87 743 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 STAG2Q8N3U4 1231 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 CCDC82Q8N4S0 544 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 NUP88Q99567 741 aaPredicted RBP13.81□□□□□ -0.2
POLR1B-205ENST00000424062 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
POLR1B-205ENST00000424062 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 PLA2G6O60733 806 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 ZBTB48P10074 688 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 CETPP11597 493 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 APLP1P51693 650 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 SRBD1Q8N5C6 995 aaKnown RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 WASF1Q92558 559 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 SLC26A6Q9BXS9 759 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 UBA5Q9GZZ9 404 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 RPAP3Q9H6T3 665 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 KIF3AQ9Y496 699 aa13.8□□□□□ -0.2
POLR1B-205ENST00000424062 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
POLR1B-205ENST00000424062 PHIPQ8WWQ0 1821 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 FMNL1O95466 1100 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 VCAM1P19320 739 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 SLC16A2P36021 539 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 GJA5P36382 358 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 STAT2P52630 851 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 ST3GAL1Q11201 340 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 NTRK3Q16288 839 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 BTNL9Q6UXG8 535 aa13.79□□□□□ -0.2
POLR1B-205ENST00000424062 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 NSUN7Q8NE18 718 aaKnown RBP13.79□□□□□ -0.2
POLR1B-205ENST00000424062 RRP36Q96EU6 259 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms