RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GRK4P32298 578 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 FLT3LGP49771 235 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 HAND2P61296 217 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 UBXN2AP68543 259 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
USP49-204ENST00000423567 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 SYNPO2Q9UMS6 1093 aa12.95□□□□□ -0.34
USP49-204ENST00000423567 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP49-204ENST00000423567 F5H6K3 240 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 KLRC3Q07444 240 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 IMMTQ16891 758 aaKnown RBP12.94□□□□□ -0.34
USP49-204ENST00000423567 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 AKNAD1Q5T1N1 836 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 SH3TC2Q8TF17 1288 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 MKL1Q969V6 931 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 ZNF333Q96JL9 665 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
USP49-204ENST00000423567 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
USP49-204ENST00000423567 ATMINO43313 823 aaPredicted RBP12.93□□□□□ -0.34
USP49-204ENST00000423567 ADCY3O60266 1144 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 PEX10O60683 326 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 FGRP09769 529 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 CHMLP26374 656 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 NT5C2P49902 561 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 IRF5Q13568 498 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 PLS1Q14651 629 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 Q3C1V9 767 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 PLEKHH3Q7Z736 793 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 LRRC47Q8N1G4 583 aaKnown RBP12.93□□□□□ -0.34
USP49-204ENST00000423567 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 INCENPQ9NQS7 918 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 TRPC6Q9Y210 931 aa12.93□□□□□ -0.34
USP49-204ENST00000423567 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
USP49-204ENST00000423567 CNMDO75829 334 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 NDUFB10O96000 172 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 MYCP01106 439 aaPredicted RBP12.92□□□□□ -0.34
USP49-204ENST00000423567 MLLT1Q03111 559 aaPredicted RBP12.92□□□□□ -0.34
USP49-204ENST00000423567 GSE1Q14687 1217 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 GPR142Q7Z601 462 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 ESR2Q92731 530 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 ATG4CQ96DT6 458 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 SLF1Q9BQI6 1058 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 SPATC1LQ9H0A9 340 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 PORCNQ9H237 461 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 PPP1R9AQ9ULJ8 1098 aa12.92□□□□□ -0.34
USP49-204ENST00000423567 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 PYGBP11216 843 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 CYP2B6P20813 491 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 RGS2P41220 211 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 RGS19P49795 217 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
USP49-204ENST00000423567 NUP88Q99567 741 aaPredicted RBP12.91□□□□□ -0.34
USP49-204ENST00000423567 SLC15A5A6NIM6 579 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 VWA5AO00534 786 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 NMT2O60551 498 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 BMP3P12645 472 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 ELNP15502 786 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 COPB2P35606 906 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 SLC1A4P43007 532 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 IKQ13123 557 aaPredicted RBP12.9□□□□□ -0.34
USP49-204ENST00000423567 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 LHX8Q68G74 356 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 NCAPG2Q86XI2 1143 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 TRMT44Q8IYL2 757 aaKnown RBP12.9□□□□□ -0.34
USP49-204ENST00000423567 PRPF38AQ8NAV1 312 aaKnown RBP12.9□□□□□ -0.34
USP49-204ENST00000423567 SHCBP1Q8NEM2 672 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 MOV10L1Q9BXT6 1211 aaKnown RBP12.9□□□□□ -0.34
USP49-204ENST00000423567 KRT23Q9C075 422 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 MROH8Q9H579 483 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 IL17RBQ9NRM6 502 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 FEM1BQ9UK73 627 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 GJD2Q9UKL4 321 aa12.9□□□□□ -0.34
USP49-204ENST00000423567 GREB1LQ9C091 1923 aaPredicted RBP12.9□□□□□ -0.35
USP49-204ENST00000423567 SGSM2O43147 1006 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 STRNO43815 780 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 ZBED4O75132 1171 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 SLC25A27O95847 323 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 HMGCRP04035 888 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms