RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 PPIP5K2O43314 1243 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 C21orf2O43822 256 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 NOVP48745 357 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 TTC38Q5R3I4 469 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 RTKN2Q8IZC4 609 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 BLIDQ8IZY5 108 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
SNX20-203ENST00000423026 CCDC34Q96HJ3 373 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 MTMR4Q9NYA4 1195 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 PCDHA4Q9UN74 947 aa10.32□□□□□ -0.76
SNX20-203ENST00000423026 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 CCDC93Q567U6 631 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 PIK3AP1Q6ZUJ8 805 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 HEATR3Q7Z4Q2 680 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 TNFRSF25Q93038 417 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 RRP36Q96EU6 259 aaKnown RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 EHD4Q9H223 541 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 SEC63Q9UGP8 760 aaKnown RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 TTLL1O95922 423 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 GOLGA8HP0CJ92 632 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 AKR1B1P15121 316 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 NLRP12P59046 1061 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 NPY5RQ15761 445 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 TAF3Q5VWG9 929 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 KANK3Q6NY19 840 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 KRBA2Q6ZNG9 492 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 C11orf57Q6ZUT1 292 aaPredicted RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 DEFB132Q7Z7B7 95 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 ZSCAN29Q8IWY8 852 aaPredicted RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 ELOA2Q8IYF1 753 aaPredicted RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 ERCC4Q92889 916 aaPredicted RBP10.31□□□□□ -0.76
SNX20-203ENST00000423026 GPKOWQ92917 476 aaPredicted RBP eCLIP10.31□□□□□ -0.76
SNX20-203ENST00000423026 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 BARHL2Q9NY43 387 aa10.31□□□□□ -0.76
SNX20-203ENST00000423026 SCN9AQ15858 1988 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 CCDC194A0A1B0GVG4 234 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 MPHOSPH10O00566 681 aaKnown RBP10.3□□□□□ -0.76
SNX20-203ENST00000423026 CYTH3O43739 400 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
SNX20-203ENST00000423026 TPM3P06753 285 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 IQCB1Q15051 598 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 ZNF174Q15697 407 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
SNX20-203ENST00000423026 USP17L2Q6R6M4 530 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 IPO4Q8TEX9 1081 aaKnown RBP10.3□□□□□ -0.76
SNX20-203ENST00000423026 TRIM5Q9C035 493 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 PI4KBQ9UBF8 816 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 CLIP2Q9UDT6 1046 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
SNX20-203ENST00000423026 VEGFAP15692 232 aaPredicted RBP10.29□□□□□ -0.76
SNX20-203ENST00000423026 TPM4P67936 248 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 NFIAQ12857 509 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 LONRF3Q496Y0 759 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 SPECC1Q5M775 1068 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 SOGA3Q5TF21 947 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 WWC2Q6AWC2 1192 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 CSRNP2Q9H175 543 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 IGKV6D-41A0A0C4DH26 115 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 STXBP3O00186 592 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 POLR2DO15514 142 aaKnown RBP10.29□□□□□ -0.76
SNX20-203ENST00000423026 PDHBP11177 359 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 GNA11P29992 359 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 SHMT1P34896 483 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 NAPAP54920 295 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 TCP10Q12799 353 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 FOXP4Q8IVH2 680 aaPredicted RBP10.29□□□□□ -0.76
SNX20-203ENST00000423026 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 PSMD1Q99460 953 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 ARID3AQ99856 593 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 BPIFA3Q9BQP9 254 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 PDGFDQ9GZP0 370 aaPredicted RBP10.29□□□□□ -0.76
SNX20-203ENST00000423026 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
SNX20-203ENST00000423026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNX20-203ENST00000423026 SMTNL1A8MU46 457 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 hCG_1984214I3L0E3 225 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 BIN1O00499 593 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 AP5Z1O43299 807 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 ATP2C1P98194 919 aaPredicted RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 GRIN1Q05586 938 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 PTGDRQ13258 359 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 DRC7Q8IY82 874 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 LRRC47Q8N1G4 583 aaKnown RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 ZNF713Q8N859 430 aaPredicted RBP10.28□□□□□ -0.76
SNX20-203ENST00000423026 VPS33BQ9H267 617 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 VAT1LQ9HCJ6 419 aa10.28□□□□□ -0.76
SNX20-203ENST00000423026 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms