RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 COL16A1Q07092 1604 aaPredicted RBP17.88■□□□□ 0.45
CDH1-202ENST00000422392 CALM1P0DP23 149 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 CALM2P0DP24 149 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 CALM3P0DP25 149 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 ERVK-24P63145 666 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 CTAGE1Q96RT6 745 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 FAM205AQ6ZU69 1335 aa17.88■□□□□ 0.45
CDH1-202ENST00000422392 BMP15O95972 392 aa17.87■□□□□ 0.45
CDH1-202ENST00000422392 TPM1P09493 284 aa17.87■□□□□ 0.45
CDH1-202ENST00000422392 TRIM49BA6NDI0 452 aa17.87■□□□□ 0.45
CDH1-202ENST00000422392 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
CDH1-202ENST00000422392 GTF2E1P29083 439 aaPredicted RBP17.87■□□□□ 0.45
CDH1-202ENST00000422392 GOLGA1Q92805 767 aa17.87■□□□□ 0.45
CDH1-202ENST00000422392 RASGRP2Q7LDG7 609 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 SLC51AQ86UW1 340 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 NELFBQ8WX92 580 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 PLIN2Q99541 437 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 NUP88Q99567 741 aaPredicted RBP17.86■□□□□ 0.45
CDH1-202ENST00000422392 PP2D1A8MPX8 630 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 KIF5CO60282 957 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 USP17L8P0C7I0 530 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 PAK1Q13153 545 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
CDH1-202ENST00000422392 SLC35F6Q8N357 371 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 STAG2Q8N3U4 1231 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 RABGGTAQ92696 567 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 NAA15Q9BXJ9 866 aaKnown RBP17.86■□□□□ 0.45
CDH1-202ENST00000422392 CHMP4BP1P59074 171 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 RCSD1Q6JBY9 416 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 CNGA4Q8IV77 575 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
CDH1-202ENST00000422392 LAMB1P07942 1786 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 PRCPP42785 496 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 COPB1P53618 953 aaKnown RBP17.85■□□□□ 0.45
CDH1-202ENST00000422392 CT47A1Q5JQC4 288 aaPredicted RBP17.85■□□□□ 0.45
CDH1-202ENST00000422392 TXNRD3Q86VQ6 643 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 ARFGAP3Q9NP61 516 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 KCNJ18B7U540 433 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 OAS2P29728 719 aaKnown RBP17.85■□□□□ 0.45
CDH1-202ENST00000422392 TXLNAP40222 546 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 KCNJ12Q14500 433 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 SF3B3Q15393 1217 aaKnown RBP17.85■□□□□ 0.45
CDH1-202ENST00000422392 KIF4BQ2VIQ3 1234 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 TCP11X2Q5H9J9 407 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 FBXO33Q7Z6M2 555 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 EEF2KMTQ96G04 330 aa17.85■□□□□ 0.45
CDH1-202ENST00000422392 CRNKL1Q9BZJ0 848 aaKnown RBP17.85■□□□□ 0.45
CDH1-202ENST00000422392 SEMA3EO15041 775 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 GTPBP6O43824 516 aaPredicted RBP17.84■□□□□ 0.45
CDH1-202ENST00000422392 ORC4O43929 436 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 RPN1P04843 607 aaKnown RBP17.84■□□□□ 0.45
CDH1-202ENST00000422392 GYS2P54840 703 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 SRGAP1Q7Z6B7 1085 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 DYNLL2Q96FJ2 89 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 SLF1Q9BQI6 1058 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 LIMA1Q9UHB6 759 aaKnown RBP17.84■□□□□ 0.45
CDH1-202ENST00000422392 RWDD2AQ9UIY3 292 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 RREB1Q92766 1687 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 ST5P78524 1137 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 TBC1D9BQ66K14 1250 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 LINC00116Q8NCU8 138 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 CHP1Q99653 195 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 FUT8Q9BYC5 575 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 ANKZF1Q9H8Y5 726 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 CDC23Q9UJX2 597 aa17.84■□□□□ 0.45
CDH1-202ENST00000422392 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.45
CDH1-202ENST00000422392 PMS1P54277 932 aaKnown RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 SMC1AQ14683 1233 aaKnown RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 ZNF658Q5TYW1 1059 aaPredicted RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 C4orf32Q8N8J7 132 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 SPATA31A1Q5TZJ5 1347 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 KIAA1551Q9HCM1 1747 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 PES1O00541 588 aaKnown RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 PCP11498 1178 aaKnown RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.44
CDH1-202ENST00000422392 KRT9P35527 623 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 STAT6P42226 847 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 UBXN1Q04323 297 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 BLIDQ8IZY5 108 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 PNKPQ96T60 521 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 TMEM60Q9H2L4 133 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 IL17RBQ9NRM6 502 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.44
CDH1-202ENST00000422392 CYP2C19P33261 490 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 TFAP4Q01664 338 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 LONRF2Q1L5Z9 754 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 RASSF8Q8NHQ8 419 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 UBXN6Q9BZV1 441 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 TFR2Q9UP52 801 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 ITIH6Q6UXX5 1313 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 LRRC10BA6NIK2 292 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 RHOXF2BP0C7M4 288 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 IRF2BP1Q8IU81 584 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 NEK11Q8NG66 645 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 RHOXF2Q9BQY4 288 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
CDH1-202ENST00000422392 CTAGE9A4FU28 777 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms