RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 APBA2Q99767 749 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 FBXO28Q9NVF7 368 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 CCDC171Q6TFL3 1326 aa21.45■■□□□ 1.02
UBXN11-208ENST00000421827 SGPL1O95470 568 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 FGAP02671 866 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 PDE4AP27815 886 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 MFAP1P55081 439 aaKnown RBP21.44■■□□□ 1.02
UBXN11-208ENST00000421827 TRIM32Q13049 653 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 MAP2K5Q13163 448 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 SHCBP1Q8NEM2 672 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 PAK6Q9NQU5 681 aaPredicted RBP21.44■■□□□ 1.02
UBXN11-208ENST00000421827 SYNPO2Q9UMS6 1093 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 ADAMTS5Q9UNA0 930 aa21.44■■□□□ 1.02
UBXN11-208ENST00000421827 A0A0G2JMZ2 1700 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 NDUFB10O96000 172 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 ZKSCAN1P17029 563 aaPredicted RBP21.43■■□□□ 1.02
UBXN11-208ENST00000421827 PLS1Q14651 629 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 DEFB118Q96PH6 123 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 NUP88Q99567 741 aaPredicted RBP21.43■■□□□ 1.02
UBXN11-208ENST00000421827 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.43■■□□□ 1.02
UBXN11-208ENST00000421827 INCENPQ9NQS7 918 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 DIAPH3Q9NSV4 1193 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 PPP1R9AQ9ULJ8 1098 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 ZMYM6O95789 1325 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 RPTORQ8N122 1335 aa21.43■■□□□ 1.02
UBXN11-208ENST00000421827 HIP1O00291 1037 aa21.42■■□□□ 1.02
UBXN11-208ENST00000421827 CAPN2P17655 700 aa21.42■■□□□ 1.02
UBXN11-208ENST00000421827 ERCC3P19447 782 aa21.42■■□□□ 1.02
UBXN11-208ENST00000421827 GRB14Q14449 540 aa21.42■■□□□ 1.02
UBXN11-208ENST00000421827 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
UBXN11-208ENST00000421827 TACC3Q9Y6A5 838 aa21.42■■□□□ 1.02
UBXN11-208ENST00000421827 TSPY2A6NKD2 308 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 VWA5AO00534 786 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 STRNO43815 780 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 ORC4O43929 436 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 TMEM132BQ14DG7 1078 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 CCL14Q16627 93 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 MAP3K21Q5TCX8 1036 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 PRPF38BQ5VTL8 546 aaKnown RBP21.41■■□□□ 1.02
UBXN11-208ENST00000421827 CWC27Q6UX04 472 aaKnown RBP21.41■■□□□ 1.02
UBXN11-208ENST00000421827 LRRC47Q8N1G4 583 aaKnown RBP21.41■■□□□ 1.02
UBXN11-208ENST00000421827 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 MROH8Q9H579 483 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 PARP14Q460N5 1801 aa21.41■■□□□ 1.02
UBXN11-208ENST00000421827 MYH4Q9Y623 1939 aa21.4■■□□□ 1.02
UBXN11-208ENST00000421827 RANBP6O60518 1105 aaKnown RBP21.4■■□□□ 1.02
UBXN11-208ENST00000421827 TFRCP02786 760 aaKnown RBP21.4■■□□□ 1.02
UBXN11-208ENST00000421827 HOXC6P09630 235 aa21.4■■□□□ 1.02
UBXN11-208ENST00000421827 FGRP09769 529 aa21.4■■□□□ 1.02
UBXN11-208ENST00000421827 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
UBXN11-208ENST00000421827 NCAPG2Q86XI2 1143 aa21.4■■□□□ 1.02
UBXN11-208ENST00000421827 GMCL1P1Q8NEA9 526 aa21.4■■□□□ 1.02
UBXN11-208ENST00000421827 SLC25A27O95847 323 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 CACNB2Q08289 660 aaPredicted RBP21.39■■□□□ 1.01
UBXN11-208ENST00000421827 TTC22Q5TAA0 569 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 UBE2Q1Q7Z7E8 422 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 PRPF38AQ8NAV1 312 aaKnown RBP21.39■■□□□ 1.01
UBXN11-208ENST00000421827 CRISPLD2Q9H0B8 497 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 IL17RBQ9NRM6 502 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 TOMM22Q9NS69 142 aa21.39■■□□□ 1.01
UBXN11-208ENST00000421827 FARP2O94887 1054 aaPredicted RBP21.38■■□□□ 1.01
UBXN11-208ENST00000421827 ADORA2AP29274 412 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 STAT3P40763 770 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 HAND2P61296 217 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 SLFN13Q68D06 897 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 DPP9Q86TI2 863 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 RIOX2Q8IUF8 465 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 REPS2Q8NFH8 660 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 NPLOC4Q8TAT6 608 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 STX8Q9UNK0 236 aa21.38■■□□□ 1.01
UBXN11-208ENST00000421827 NMT2O60551 498 aa21.37■■□□□ 1.01
UBXN11-208ENST00000421827 GSPT1P15170 499 aaKnown RBP21.37■■□□□ 1.01
UBXN11-208ENST00000421827 MFSD14CQ5VZR4 134 aa21.37■■□□□ 1.01
UBXN11-208ENST00000421827 ABRAQ8N0Z2 381 aa21.37■■□□□ 1.01
UBXN11-208ENST00000421827 FLRT1Q9NZU1 646 aa21.37■■□□□ 1.01
UBXN11-208ENST00000421827 FEM1BQ9UK73 627 aa21.37■■□□□ 1.01
UBXN11-208ENST00000421827 ZNF214Q9UL59 606 aaPredicted RBP21.37■■□□□ 1.01
UBXN11-208ENST00000421827 BMP3P12645 472 aa21.36■■□□□ 1.01
UBXN11-208ENST00000421827 RRP12Q5JTH9 1297 aaKnown RBP21.36■■□□□ 1.01
UBXN11-208ENST00000421827 SLC5A4Q9NY91 659 aa21.36■■□□□ 1.01
UBXN11-208ENST00000421827 COL11A1P12107 1806 aaPredicted RBP21.36■■□□□ 1.01
UBXN11-208ENST00000421827 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 ZBED4O75132 1171 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 PCP11498 1178 aaKnown RBP21.35■■□□□ 1.01
UBXN11-208ENST00000421827 FCER1AP12319 257 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 COPB2P35606 906 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 AKNAD1Q5T1N1 836 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 MFSD6Q6ZSS7 791 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 STAG1Q8WVM7 1258 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 GMCL1Q96IK5 515 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 NBPF3Q9H094 633 aa21.35■■□□□ 1.01
UBXN11-208ENST00000421827 CTDP1Q9Y5B0 961 aaPredicted RBP21.35■■□□□ 1.01
UBXN11-208ENST00000421827 COBLO75128 1261 aa21.34■■□□□ 1.01
UBXN11-208ENST00000421827 SLC1A4P43007 532 aa21.34■■□□□ 1.01
UBXN11-208ENST00000421827 NOVP48745 357 aa21.34■■□□□ 1.01
UBXN11-208ENST00000421827 TBC1D10CQ8IV04 446 aa21.34■■□□□ 1.01
UBXN11-208ENST00000421827 ANKLE1Q8NAG6 615 aa21.34■■□□□ 1.01
UBXN11-208ENST00000421827 DSCC1Q9BVC3 393 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms