RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 RGS2P41220 211 aa29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 NKX2-3Q8TAU0 364 aa29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 ATG4CQ96DT6 458 aa29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 DSCC1Q9BVC3 393 aa29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 SPATC1LQ9H0A9 340 aa29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 RNF41Q9H4P4 317 aaPredicted RBP29.67■■■□□ 2.34
SNAPC3-203ENST00000421710 CCL5P13501 91 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 NT5C2P49902 561 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 MTFR1Q15390 333 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 MORN1Q5T089 497 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 SHCBP1Q8NEM2 672 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 RUFY2Q8WXA3 655 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 PPP1R9AQ9ULJ8 1098 aa29.66■■■□□ 2.34
SNAPC3-203ENST00000421710 SAMD1Q6SPF0 538 aaPredicted RBP29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 MFSD6Q6ZSS7 791 aa29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 LRRC47Q8N1G4 583 aaKnown RBP29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 MOV10L1Q9BXT6 1211 aaKnown RBP29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 RNF208Q9H0X6 261 aa29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 STX8Q9UNK0 236 aa29.65■■■□□ 2.34
SNAPC3-203ENST00000421710 SLC15A5A6NIM6 579 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 ZNF213O14771 459 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 CYP2B6P20813 491 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 HAND2P61296 217 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 PLS1Q14651 629 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 AKNAD1Q5T1N1 836 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 STAG1Q8WVM7 1258 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 APBA2Q99767 749 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 SLF1Q9BQI6 1058 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 INCENPQ9NQS7 918 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 CTNNA3Q9UI47 895 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 ADAMTS5Q9UNA0 930 aa29.64■■■□□ 2.34
SNAPC3-203ENST00000421710 LAMA4Q16363 1823 aa29.64■■■□□ 2.33
SNAPC3-203ENST00000421710 EN2P19622 333 aaPredicted RBP29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 PTPREP23469 700 aa29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 RRP12Q5JTH9 1297 aaKnown RBP29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 USP6NLQ92738 828 aa29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 MROH8Q9H579 483 aa29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 FBXO28Q9NVF7 368 aa29.63■■■□□ 2.33
SNAPC3-203ENST00000421710 BRCA2P51587 3418 aa29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 STRNO43815 780 aa29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 GJB1P08034 283 aa29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 MAP2K5Q13163 448 aa29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 SLFN13Q68D06 897 aa29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 NUP88Q99567 741 aaPredicted RBP29.62■■■□□ 2.33
SNAPC3-203ENST00000421710 VWA5AO00534 786 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 SLC25A27O95847 323 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 ZKSCAN1P17029 563 aaPredicted RBP29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 CAPN2P17655 700 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 COPB2P35606 906 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 GRB14Q14449 540 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 PRPF38AQ8NAV1 312 aaKnown RBP29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 UNC93B1Q9H1C4 597 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 IL17RBQ9NRM6 502 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 FEM1BQ9UK73 627 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 TACC3Q9Y6A5 838 aa29.61■■■□□ 2.33
SNAPC3-203ENST00000421710 COL11A1P12107 1806 aaPredicted RBP29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 BMP3P12645 472 aa29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 ERCC3P19447 782 aa29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 TMEM132BQ14DG7 1078 aa29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 IMMTQ16891 758 aaKnown RBP29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 GMCL1Q96IK5 515 aa29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 TCP11L1Q9NUJ3 509 aa29.6■■■□□ 2.33
SNAPC3-203ENST00000421710 ZNF236Q9UL36 1845 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 CHMLP26374 656 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 GJA8P48165 433 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 NCAPG2Q86XI2 1143 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 TBC1D10CQ8IV04 446 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 TRIB2Q92519 343 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 ESR2Q92731 530 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 NBPF3Q9H094 633 aa29.59■■■□□ 2.33
SNAPC3-203ENST00000421710 NMT2O60551 498 aa29.58■■■□□ 2.33
SNAPC3-203ENST00000421710 SLC1A4P43007 532 aa29.58■■■□□ 2.33
SNAPC3-203ENST00000421710 NOVP48745 357 aa29.58■■■□□ 2.33
SNAPC3-203ENST00000421710 CTDP1Q9Y5B0 961 aaPredicted RBP29.58■■■□□ 2.33
SNAPC3-203ENST00000421710 TNRC18O15417 2968 aaPredicted RBP29.58■■■□□ 2.33
SNAPC3-203ENST00000421710 NEFLP07196 543 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 HOXC6P09630 235 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 STAT3P40763 770 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 RIOX2Q8IUF8 465 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 ABRAQ8N0Z2 381 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 SLC5A4Q9NY91 659 aa29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 ISY1Q9ULR0 285 aaKnown RBP29.57■■■□□ 2.32
SNAPC3-203ENST00000421710 RPTORQ8N122 1335 aa29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 ZBED4O75132 1171 aa29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 FDX1P10109 184 aa29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 REPS2Q8NFH8 660 aa29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 U2AF1L4Q8WU68 220 aaKnown RBP29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 HMX1Q9NP08 348 aaPredicted RBP29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 PAK6Q9NQU5 681 aaPredicted RBP29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 ZNF214Q9UL59 606 aaPredicted RBP29.56■■■□□ 2.32
SNAPC3-203ENST00000421710 STAT2P52630 851 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 DPP9Q86TI2 863 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 FAM160B2Q86V87 743 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 CHURC1Q8WUH1 139 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 KIFC2Q96AC6 838 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 TEX13BQ9BXU2 312 aa29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.55■■■□□ 2.32
SNAPC3-203ENST00000421710 NEDD4P46934 1319 aa29.54■■■□□ 2.32
SNAPC3-203ENST00000421710 SGPL1O95470 568 aa29.54■■■□□ 2.32
SNAPC3-203ENST00000421710 TOP1P11387 765 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms