RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RBM28Q9NW13 759 aaKnown RBP14.56□□□□□ -0.08
TMEM53-206ENST00000420706 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 GOLGA8HP0CJ92 632 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 BMP3P12645 472 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 KIF5BP33176 963 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 SLC1A4P43007 532 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 HMGCS2P54868 508 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 NTRK3Q16288 839 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 RGMBQ6NW40 437 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 SPICE1Q8N0Z3 855 aa14.55□□□□□ -0.08
TMEM53-206ENST00000420706 A0A0G2JLL6 359 aaPredicted RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 CTDNEP1O95476 244 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 GNAQP50148 359 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 APLP1P51693 650 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 GPATCH4Q5T3I0 446 aaKnown RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 SPRYD7Q5W111 196 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 TTBK2Q6IQ55 1244 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 KCTD1Q719H9 257 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 PRRT2Q7Z6L0 340 aaPredicted RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 LPAR1Q92633 364 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 GPCPD1Q9NPB8 672 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
TMEM53-206ENST00000420706 ABT1Q9ULW3 272 aaKnown RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 FRMPD2Q68DX3 1309 aaPredicted RBP14.54□□□□□ -0.08
TMEM53-206ENST00000420706 TMEM232C9JQI7 657 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 WDR46O15213 610 aaKnown RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 DHX16O60231 1041 aaKnown RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 PLEKHA8P1O95397 391 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 SMARCA1P28370 1054 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 ZNF157P51786 506 aaPredicted RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 FUT2Q10981 343 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 CCDC96Q2M329 555 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 FAM83BQ5T0W9 1011 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 NBPF11Q86T75 865 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 RASAL3Q86YV0 1011 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 SRBD1Q8N5C6 995 aaKnown RBP14.53□□□□□ -0.08
TMEM53-206ENST00000420706 HHIPL1Q96JK4 782 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 LZTS2Q9BRK4 669 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 UBA5Q9GZZ9 404 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 PTPRFP10586 1907 aa14.53□□□□□ -0.08
TMEM53-206ENST00000420706 CPLX1O14810 134 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 PLA2G6O60733 806 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 DTNBO60941 627 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 IFNAR1P17181 557 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 VCAM1P19320 739 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 HTRA3P83110 453 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 SNAPC2Q13487 334 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 MOGSQ13724 837 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 CPLX2Q6PUV4 134 aaKnown RBP14.52□□□□□ -0.09
TMEM53-206ENST00000420706 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 PROCA1Q8NCQ7 364 aaPredicted RBP14.52□□□□□ -0.09
TMEM53-206ENST00000420706 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
TMEM53-206ENST00000420706 INTS4Q96HW7 963 aaKnown RBP14.52□□□□□ -0.09
TMEM53-206ENST00000420706 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 LLPHQ9BRT6 129 aaKnown RBP14.52□□□□□ -0.09
TMEM53-206ENST00000420706 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
TMEM53-206ENST00000420706 CYTH3O43739 400 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 SLC16A2P36021 539 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 GTF2A2P52657 109 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 GADL1Q6ZQY3 521 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 CATSPERGQ6ZRH7 1159 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 FASTKD5Q7L8L6 764 aaKnown RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 SMARCC2Q8TAQ2 1214 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 CHURC1Q8WUH1 139 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 IPO9Q96P70 1041 aaKnown RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 RIOX1Q9H6W3 641 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 FEM1BQ9UK73 627 aa14.51□□□□□ -0.09
TMEM53-206ENST00000420706 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
TMEM53-206ENST00000420706 FAM155AB1AL88 458 aaPredicted RBP14.5□□□□□ -0.09
TMEM53-206ENST00000420706 PRPF3O43395 683 aaKnown RBP14.5□□□□□ -0.09
TMEM53-206ENST00000420706 JAK2O60674 1132 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 PPFIA3O75145 1194 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 CDKL5O76039 1030 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 SLC10A3P09131 477 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 CETPP11597 493 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
TMEM53-206ENST00000420706 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
TMEM53-206ENST00000420706 DEFB115Q30KQ5 88 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 TREML2Q5T2D2 321 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 FAM160B2Q86V87 743 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 SPRYD3Q8NCJ5 442 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 PHKBQ93100 1093 aa14.5□□□□□ -0.09
TMEM53-206ENST00000420706 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms