RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 INF2Q27J81 1249 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 UIMC1Q96RL1 719 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 BLZF1Q9H2G9 400 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 FANCLQ9NW38 375 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 TUBE1Q9UJT0 475 aa10.06□□□□□ -0.8
SNCA-206ENST00000420646 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 CDC42EP5Q6NZY7 148 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 COA1Q9GZY4 146 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 MAN1B1Q9UKM7 699 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 GAKO14976 1311 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 MPHOSPH10O00566 681 aaKnown RBP10.05□□□□□ -0.8
SNCA-206ENST00000420646 ACTN4O43707 911 aaKnown RBP10.05□□□□□ -0.8
SNCA-206ENST00000420646 GRM4Q14833 912 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 KLHL10Q6JEL2 608 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
SNCA-206ENST00000420646 BLIDQ8IZY5 108 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 PIGSQ96S52 555 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 BRMS1Q9HCU9 246 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 FAM237AA0A1B0GTK4 181 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
SNCA-206ENST00000420646 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 CAVIN2O95810 425 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 AOC3Q16853 763 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.05□□□□□ -0.8
SNCA-206ENST00000420646 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 MED15Q96RN5 788 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
SNCA-206ENST00000420646 ALDH1B1P30837 517 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 PDE6BP35913 854 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 SLC16A2P36021 539 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 STX17P56962 302 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
SNCA-206ENST00000420646 C16orf45Q96MC5 204 aaPredicted RBP10.04□□□□□ -0.8
SNCA-206ENST00000420646 ANKRD31Q8N7Z5 1873 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 TMEM232C9JQI7 657 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 TTBK2Q6IQ55 1244 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 SARM1Q6SZW1 724 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 TMC6Q7Z403 805 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 COA7Q96BR5 231 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 TRMT1Q9NXH9 659 aaKnown RBP10.04□□□□□ -0.8
SNCA-206ENST00000420646 CEP131Q9UPN4 1083 aa10.04□□□□□ -0.8
SNCA-206ENST00000420646 ROBO3Q96MS0 1386 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 PCDHA6Q9UN73 950 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 SCAF8Q9UPN6 1271 aaKnown RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 MAPK8IP1Q9UQF2 711 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 PCDHA8Q9Y5H6 950 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 STXBP3O00186 592 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 C21orf2O43822 256 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 PLCG2P16885 1265 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 FANCCQ00597 558 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 MRFAP1L1Q96HT8 127 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 MTRQ99707 1265 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 TMX4Q9H1E5 349 aaPredicted RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
SNCA-206ENST00000420646 PCDHA4Q9UN74 947 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 ADAMTSL1Q8N6G6 1762 aa10.03□□□□□ -0.8
SNCA-206ENST00000420646 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.8
SNCA-206ENST00000420646 H0YIN7 160 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 SERPINC1P01008 464 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.8
SNCA-206ENST00000420646 CRKP46108 304 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 NAPAP54920 295 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 ATP2C1P98194 919 aaPredicted RBP10.02□□□□□ -0.8
SNCA-206ENST00000420646 KARSQ15046 597 aaKnown RBP10.02□□□□□ -0.8
SNCA-206ENST00000420646 JAKMIP3Q5VZ66 844 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 KCTD1Q719H9 257 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 ANKS1AQ92625 1134 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 SMARCE1Q969G3 411 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 PAGE5Q96GU1 130 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.8
SNCA-206ENST00000420646 MTMR4Q9NYA4 1195 aa10.02□□□□□ -0.8
SNCA-206ENST00000420646 CCDC194A0A1B0GVG4 234 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 PDHBP11177 359 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 SKILP12757 684 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 SLF2Q8IX21 1173 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 TCP11L1Q9NUJ3 509 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 BARHL2Q9NY43 387 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 LAMB1P07942 1786 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
SNCA-206ENST00000420646 SMCO2A6NFE2 343 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 ECE2O60344 883 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 TAL1P17542 331 aaPredicted RBP10.02□□□□□ -0.81
SNCA-206ENST00000420646 SHMT1P34896 483 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 BAG6P46379 1132 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 SNAP25P60880 206 aa10.02□□□□□ -0.81
SNCA-206ENST00000420646 MYL5Q02045 173 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms