RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 IGKV6D-41A0A0C4DH26 115 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 RAD21O60216 631 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.03
LINC00642-201ENST00000419459 ECE1P42892 770 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 ICA1Q05084 483 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 SCRN1Q12765 414 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 DCAF15Q66K64 600 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 TMEM179Q6ZVK1 233 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 SGMS1Q86VZ5 419 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 CMTR1Q8N1G2 835 aaKnown RBP14.83□□□□□ -0.03
LINC00642-201ENST00000419459 FBXL16Q8N461 479 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 TSC1Q92574 1164 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 ALDH8A1Q9H2A2 487 aaPredicted RBP14.83□□□□□ -0.03
LINC00642-201ENST00000419459 KCNF1Q9H3M0 494 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 SLC12A7Q9Y666 1083 aa14.83□□□□□ -0.03
LINC00642-201ENST00000419459 CENPFP49454 3210 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 USP2O75604 605 aaPredicted RBP14.83□□□□□ -0.04
LINC00642-201ENST00000419459 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.04
LINC00642-201ENST00000419459 SIAH1Q8IUQ4 282 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 CABP5Q9NP86 173 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.04
LINC00642-201ENST00000419459 TTLL1O95922 423 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 SYT1P21579 422 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 DGKZQ13574 1117 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 ZYXQ15942 572 aaKnown RBP14.82□□□□□ -0.04
LINC00642-201ENST00000419459 C17orf53Q8N3J3 647 aaPredicted RBP14.82□□□□□ -0.04
LINC00642-201ENST00000419459 PNMA1Q8ND90 353 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 SMTNL1A8MU46 457 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 ZBTB43O43298 467 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 CDC27P30260 824 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
LINC00642-201ENST00000419459 DGKHQ86XP1 1220 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 CCDC82Q8N4S0 544 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 FAM200AQ8TCP9 573 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 CGNQ9P2M7 1197 aaKnown RBP14.82□□□□□ -0.04
LINC00642-201ENST00000419459 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 SMC3Q9UQE7 1217 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 PAXBP1Q9Y5B6 917 aa14.82□□□□□ -0.04
LINC00642-201ENST00000419459 KIF3CO14782 793 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
LINC00642-201ENST00000419459 ASNSP08243 561 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 ADD1P35611 737 aaKnown RBP14.81□□□□□ -0.04
LINC00642-201ENST00000419459 EVCP57679 992 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 TROAPQ12815 778 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 VGLL4Q14135 290 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.81□□□□□ -0.04
LINC00642-201ENST00000419459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC00642-201ENST00000419459 CNKSR2Q8WXI2 1034 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 CLMNQ96JQ2 1002 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 KANSL2Q9H9L4 492 aa14.81□□□□□ -0.04
LINC00642-201ENST00000419459 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
LINC00642-201ENST00000419459 YY1P25490 414 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 NF2P35240 595 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 METAP2P50579 478 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC00642-201ENST00000419459 SPICE1Q8N0Z3 855 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 GTF3C6Q969F1 213 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 ZSCAN31Q96LW9 406 aaPredicted RBP14.8□□□□□ -0.04
LINC00642-201ENST00000419459 MTA3Q9BTC8 594 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 ZNF112Q9UJU3 913 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 TAOK2Q9UL54 1235 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 CATIPQ7Z7H3 387 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 ZNF274Q96GC6 653 aaPredicted RBP14.8□□□□□ -0.04
LINC00642-201ENST00000419459 CPVLQ9H3G5 476 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 SH2B1Q9NRF2 756 aaPredicted RBP14.8□□□□□ -0.04
LINC00642-201ENST00000419459 ELP1O95163 1332 aa14.8□□□□□ -0.04
LINC00642-201ENST00000419459 GOLGA8AA7E2F4 631 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 UBE2Q2LH0YL09 131 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 PFKFB2O60825 505 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 CELF2O95319 508 aaKnown RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 ITGBL1O95965 494 aaPredicted RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 TOP1P11387 765 aaKnown RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 NOVP48745 357 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 FAM193AP78312 1265 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 FOXD4L6Q3SYB3 417 aaPredicted RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 USP17L2Q6R6M4 530 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 FOXD4L3Q6VB84 417 aaPredicted RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 TMTC2Q8N394 836 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 STAG2Q8N3U4 1231 aa14.79□□□□□ -0.04
LINC00642-201ENST00000419459 FAM217BQ9NTX9 383 aaPredicted RBP14.79□□□□□ -0.04
LINC00642-201ENST00000419459 FIBPO43427 364 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 JAK2O60674 1132 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 U2AF2P26368 475 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC00642-201ENST00000419459 NCBP1Q09161 790 aaKnown RBP14.78□□□□□ -0.04
LINC00642-201ENST00000419459 KIAA1755Q5JYT7 1200 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 NUP88Q99567 741 aaPredicted RBP14.78□□□□□ -0.04
LINC00642-201ENST00000419459 FRMPD2Q68DX3 1309 aaPredicted RBP14.78□□□□□ -0.04
LINC00642-201ENST00000419459 TRPM7Q96QT4 1865 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms