RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
HMGN1-205ENST00000419378 KIF4BQ2VIQ3 1234 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 TBC1D10BQ4KMP7 808 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-205ENST00000419378 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 STRIP1Q5VSL9 837 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 KLHDC4Q8TBB5 520 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 GMLQ99445 158 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 MXD3Q9BW11 206 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
HMGN1-205ENST00000419378 SENP2Q9HC62 589 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 CD209Q9NNX6 404 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 PGAP2Q9UHJ9 254 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 RIPOR2Q9Y4F9 1068 aa8.62□□□□□ -1.03
HMGN1-205ENST00000419378 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 TRAF5O00463 557 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 IL1R1P14778 569 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 ZNF280AP59817 542 aaPredicted RBP8.61□□□□□ -1.03
HMGN1-205ENST00000419378 PTSQ03393 145 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
HMGN1-205ENST00000419378 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■□□□□ 10.3
HMGN1-205ENST00000419378 UBE4AQ14139 1066 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 METTL24Q5JXM2 366 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 IER5Q5VY09 327 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 PGBD3Q8N328 593 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 VGLL2Q8N8G2 317 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 GPR152Q8TDT2 470 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 EDEM1Q92611 657 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 ASB16Q96NS5 453 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 CRISPLD1Q9H336 500 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 GMPR2Q9P2T1 348 aaKnown RBP8.61□□□□□ -1.03
HMGN1-205ENST00000419378 DMGDHQ9UI17 866 aaKnown RBP8.61□□□□□ -1.03
HMGN1-205ENST00000419378 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 HDAC5Q9UQL6 1122 aa8.61□□□□□ -1.03
HMGN1-205ENST00000419378 ASTN2O75129 1339 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-205ENST00000419378 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 EYA2O00167 538 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 OPLAHO14841 1288 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 PDE8BO95263 885 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 GNAI3P08754 354 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 ERCC3P19447 782 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 GYG1P46976 350 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 IDH3AP50213 366 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 CDC37L1Q7L3B6 337 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
HMGN1-205ENST00000419378 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 TRIM47Q96LD4 638 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 MYOZ2Q9NPC6 264 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 CNTNAP1P78357 1384 aa8.6□□□□□ -1.03
HMGN1-205ENST00000419378 CIAO1O76071 339 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 PDGFAP04085 211 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 RLBP1P12271 317 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 MZF1P28698 734 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-205ENST00000419378 HIBADHP31937 336 aaKnown RBP8.59□□□□□ -1.03
HMGN1-205ENST00000419378 PUM3Q15397 648 aaKnown RBP8.59□□□□□ -1.03
HMGN1-205ENST00000419378 Q6ZNB5 142 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 ATG9AQ7Z3C6 839 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
HMGN1-205ENST00000419378 RGL4Q8IZJ4 473 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 CERS5Q8N5B7 392 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.03
HMGN1-205ENST00000419378 SIL1Q9H173 461 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 GGA3Q9NZ52 723 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 JAG2Q9Y219 1238 aa8.59□□□□□ -1.03
HMGN1-205ENST00000419378 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 ADM5C9JUS6 153 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 SRGAP3O43295 1099 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 SASH1O94885 1247 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 GNAI2P04899 355 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 FGFR2P21802 821 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 MTX1Q13505 466 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 ANGEL2Q5VTE6 544 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 CST9Q5W186 159 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 KRT26Q7Z3Y9 468 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 USP48Q86UV5 1035 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 JMYQ8N9B5 988 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 TDRD7Q8NHU6 1098 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 DCPSQ96C86 337 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 CITED4Q96RK1 184 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 COPRSQ9NQ92 184 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 ABT1Q9ULW3 272 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 PA2G4Q9UQ80 394 aaKnown RBP8.58□□□□□ -1.04
HMGN1-205ENST00000419378 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
HMGN1-205ENST00000419378 FAM205AQ6ZU69 1335 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
HMGN1-205ENST00000419378 CELF2O95319 508 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms