RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CBFA2T2O43439 604 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 CASP7P55210 303 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 CHMP4BP1P59074 171 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZC3H6P61129 1189 aaKnown RBP7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 PPP2R5EQ16537 467 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZNF408Q9H9D4 720 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 GPATCH2Q9NW75 528 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
HMGB1P49-201ENST00000418882 DNAJC25-GNG10A0A024R161 153 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 CTSKP43235 329 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 GNL2Q13823 731 aaKnown RBP7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 RALGPS1Q5JS13 557 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 SLC23A3Q6PIS1 610 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 TMPRSS7Q7RTY8 843 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 C7orf61Q8IZ16 206 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 PI4K2BQ8TCG2 481 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 DHRS1Q96LJ7 313 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 RC3H2Q9HBD1 1191 aaKnown RBP7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 LMCD1Q9NZU5 365 aa7.26□□□□□ -1.25
HMGB1P49-201ENST00000418882 MEIS1O00470 390 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 SIGLEC6O43699 453 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 SSBP05455 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 EGR3Q06889 387 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 VPS37DQ86XT2 251 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 USHBP1Q8N6Y0 703 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 SYTL5Q8TDW5 730 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 TCTN2Q96GX1 697 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 EBF1Q9UH73 591 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZNF451Q9Y4E5 1061 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 PCDHB12Q9Y5F1 795 aa7.25□□□□□ -1.25
HMGB1P49-201ENST00000418882 B2RBV5 119 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 LTKP29376 864 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 TEKQ02763 1124 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 CLEC16AQ2KHT3 1053 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 MICAL1Q8TDZ2 1067 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 SLAMF8Q9P0V8 285 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 SUSD2Q9UGT4 822 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 FBXL21Q9UKT6 434 aa7.24□□□□□ -1.25
HMGB1P49-201ENST00000418882 PAPLNO95428 1278 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZNF445P59923 1031 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 BBS9Q3SYG4 887 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 GNPTABQ3T906 1256 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZPBP2Q6X784 338 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 DAGLBQ8NCG7 672 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 BRF1Q92994 677 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 ALPK1Q96QP1 1244 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 HAUS7Q99871 368 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 FOXP3Q9BZS1 431 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 ADAMTS10Q9H324 1103 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 PHAXQ9H814 394 aaKnown RBP7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 GP6Q9HCN6 339 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 CHST7Q9NS84 486 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 PRKAG3Q9UGI9 489 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 CTNND2Q9UQB3 1225 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 ZNF281Q9Y2X9 895 aa7.23□□□□□ -1.25
HMGB1P49-201ENST00000418882 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 ITGB5P18084 799 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 CD247P20963 164 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 IRAK1P51617 712 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 ERVFC1P60507 584 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 CRTC3Q6UUV7 619 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 NPM2Q86SE8 214 aaKnown RBP7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 HNRNPLLQ8WVV9 542 aaKnown RBP7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 SMARCC1Q92922 1105 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 C8orf37Q96NL8 207 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 KLHL25Q9H0H3 589 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 SLC12A7Q9Y666 1083 aa7.22□□□□□ -1.25
HMGB1P49-201ENST00000418882 H0Y8X5 98 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 EPHX1P07099 455 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 SLC7A5Q01650 507 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 MCTP1Q6DN14 999 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 VHLLQ6RSH7 139 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 ZNF655Q8N720 491 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 ZNF513Q8N8E2 541 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 G6PC3Q9BUM1 346 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 ASCC2Q9H1I8 757 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 SP110Q9HB58 689 aa7.21□□□□□ -1.26
HMGB1P49-201ENST00000418882 FKTNO75072 461 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 EFEMP2O95967 443 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 ZGLP1P0C6A0 271 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 FYB2Q5VWT5 728 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 MRM1Q6IN84 353 aaKnown RBP7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 C6orf15Q6UXA7 325 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 CELF2-AS1Q8N7Q2 184 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 FGD4Q96M96 766 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 ACTR10Q9NZ32 417 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 APEX2Q9UBZ4 518 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 TMEM59LQ9UK28 342 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 TCFL5Q9UL49 500 aa7.2□□□□□ -1.26
HMGB1P49-201ENST00000418882 SYPP08247 313 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 HK2P52789 917 aa7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
HMGB1P49-201ENST00000418882 FIBCD1Q8N539 461 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms