RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 RCSD1Q6JBY9 416 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 USP50Q70EL3 339 aaPredicted RBP12.41□□□□□ -0.42
NPHP1-205ENST00000418527 SMARCC2Q8TAQ2 1214 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 MAP3K14Q99558 947 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 TMEM47Q9BQJ4 181 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 CLIP2Q9UDT6 1046 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 NID2Q14112 1375 aa12.41□□□□□ -0.42
NPHP1-205ENST00000418527 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
NPHP1-205ENST00000418527 GDF11O95390 407 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 CDC27P30260 824 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 EPHX2P34913 555 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 ICA1Q05084 483 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 TRIM29Q14134 588 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 MIGA2Q7L4E1 593 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
NPHP1-205ENST00000418527 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
NPHP1-205ENST00000418527 IGKV6D-41A0A0C4DH26 115 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 GH2P01242 217 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
NPHP1-205ENST00000418527 IFNAR1P17181 557 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 SYT1P21579 422 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 TROAPQ12815 778 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 RBM27Q9P2N5 1060 aaKnown RBP12.39□□□□□ -0.43
NPHP1-205ENST00000418527 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
NPHP1-205ENST00000418527 ARIH1Q9Y4X5 557 aaPredicted RBP12.39□□□□□ -0.43
NPHP1-205ENST00000418527 ATP6V1DQ9Y5K8 247 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 SIPA1L1O43166 1804 aa12.39□□□□□ -0.43
NPHP1-205ENST00000418527 STK36Q9NRP7 1315 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 GOLGA6L22H0YM25 854 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 RAD21O60216 631 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 FMNL1O95466 1100 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 BRD1O95696 1058 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 ASNSP08243 561 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 ZSCAN22P10073 491 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 XBP1P17861 261 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 HIRAP54198 1017 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 GRM4Q14833 912 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 SEPT2Q15019 361 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 FOXD4L5Q5VV16 416 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 USP48Q86UV5 1035 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 CCDC82Q8N4S0 544 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 FOXD4L4Q8WXT5 416 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 SH2D4AQ9H788 454 aa12.38□□□□□ -0.43
NPHP1-205ENST00000418527 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
NPHP1-205ENST00000418527 PPFIA3O75145 1194 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 DEXIO95424 95 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 SLURP2P0DP57 97 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 NF2P35240 595 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 CAP2P40123 477 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 NOVP48745 357 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 FOSBP53539 338 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 NBPF12Q5TAG4 269 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 LRRC47Q8N1G4 583 aaKnown RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 PHKBQ93100 1093 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 TEPSINQ96N21 525 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 ALG1Q9BT22 464 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-205ENST00000418527 ZBTB21Q9ULJ3 1066 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 SCN4AP35499 1836 aa12.37□□□□□ -0.43
NPHP1-205ENST00000418527 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
NPHP1-205ENST00000418527 DTNBO60941 627 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPHP1-205ENST00000418527 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 KRT26Q7Z3Y9 468 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 MKL1Q969V6 931 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-205ENST00000418527 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 SYNPO2Q9UMS6 1093 aa12.36□□□□□ -0.43
NPHP1-205ENST00000418527 KLRF2D3W0D1 207 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
NPHP1-205ENST00000418527 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
NPHP1-205ENST00000418527 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms