RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 VPS54Q9P1Q0 977 aa24■■□□□ 1.43
CASC3-203ENST00000418132 FRMPD2Q68DX3 1309 aaPredicted RBP23.99■■□□□ 1.43
CASC3-203ENST00000418132 SAFBQ15424 915 aaKnown RBP eCLIP23.99■■□□□ 1.43
CASC3-203ENST00000418132 DCAF4Q8WV16 495 aa23.99■■□□□ 1.43
CASC3-203ENST00000418132 HOOK2Q96ED9 719 aa23.99■■□□□ 1.43
CASC3-203ENST00000418132 SCAND2PQ9GZW5 306 aaPredicted RBP23.99■■□□□ 1.43
CASC3-203ENST00000418132 A0A1W2PRG0 241 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 CPVLQ9H3G5 476 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 TFIP11Q9UBB9 837 aaKnown RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 CFAP45Q9UL16 551 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 ASNSP08243 561 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 VEGFAP15692 232 aaPredicted RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 SLFN13Q68D06 897 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 DIS3L2Q8IYB7 885 aaKnown RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 PIBF1Q8WXW3 757 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 ZNF396Q96N95 335 aaPredicted RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 FOXP1Q9H334 677 aaPredicted RBP23.98■■□□□ 1.43
CASC3-203ENST00000418132 ARHGEF10LQ9HCE6 1279 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 ATAD5Q96QE3 1844 aa23.98■■□□□ 1.43
CASC3-203ENST00000418132 F5H6K3 240 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 KLRC3Q07444 240 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 MYSM1Q5VVJ2 828 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 DCAF15Q66K64 600 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 GMCL1Q96IK5 515 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 UBA5Q9GZZ9 404 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 SH3GLB2Q9NR46 395 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 GINM1Q9NU53 330 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 TMX2Q9Y320 296 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 ELP1O95163 1332 aa23.97■■□□□ 1.43
CASC3-203ENST00000418132 GLTPD2A6NH11 291 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 BTBD18B2RXH4 712 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 SOCS7O14512 581 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 GPCPD1Q9NPB8 672 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 POLR2AP24928 1970 aaKnown RBP23.96■■□□□ 1.43
CASC3-203ENST00000418132 SLC1A4P43007 532 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 GNL2Q13823 731 aaKnown RBP23.96■■□□□ 1.43
CASC3-203ENST00000418132 CCDC96Q2M329 555 aa23.96■■□□□ 1.43
CASC3-203ENST00000418132 RRP36Q96EU6 259 aaKnown RBP23.96■■□□□ 1.43
CASC3-203ENST00000418132 CTNND1O60716 968 aaKnown RBP23.95■■□□□ 1.42
CASC3-203ENST00000418132 NDUFB10O96000 172 aa23.95■■□□□ 1.42
CASC3-203ENST00000418132 KLHL40Q2TBA0 621 aa23.95■■□□□ 1.42
CASC3-203ENST00000418132 NOSTRINQ8IVI9 506 aa23.95■■□□□ 1.42
CASC3-203ENST00000418132 FAM177A1Q8N128 213 aaPredicted RBP23.95■■□□□ 1.42
CASC3-203ENST00000418132 LEO1Q8WVC0 666 aaPredicted RBP23.95■■□□□ 1.42
CASC3-203ENST00000418132 USP28Q96RU2 1077 aa23.95■■□□□ 1.42
CASC3-203ENST00000418132 DDX49Q9Y6V7 483 aaKnown RBP23.95■■□□□ 1.42
CASC3-203ENST00000418132 ECE1P42892 770 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 NPY5RQ15761 445 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 KCTD1Q719H9 257 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 ACER1Q8TDN7 264 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 ZNF341Q9BYN7 854 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 ZNF112Q9UJU3 913 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 PRAMEF18Q5VWM3 479 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 WWC2Q6AWC2 1192 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 TTBK2Q6IQ55 1244 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 SPATA32Q96LK8 384 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 BARHL2Q9NY43 387 aa23.94■■□□□ 1.42
CASC3-203ENST00000418132 GADD45BO75293 160 aaPredicted RBP23.93■■□□□ 1.42
CASC3-203ENST00000418132 USP50Q70EL3 339 aaPredicted RBP23.93■■□□□ 1.42
CASC3-203ENST00000418132 GPKOWQ92917 476 aaPredicted RBP eCLIP23.93■■□□□ 1.425e-7■■■■□ 23.9
CASC3-203ENST00000418132 PIGSQ96S52 555 aa23.93■■□□□ 1.42
CASC3-203ENST00000418132 VAT1LQ9HCJ6 419 aa23.93■■□□□ 1.42
CASC3-203ENST00000418132 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.93■■□□□ 1.42
CASC3-203ENST00000418132 SEC63Q9UGP8 760 aaKnown RBP23.93■■□□□ 1.42
CASC3-203ENST00000418132 SSC5DA1L4H1 1573 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 RAD21O60216 631 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 KRT2P35908 639 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 ADGRF4Q8IZF3 695 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 GPT2Q8TD30 523 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 OXER1Q8TDS5 423 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 SH2D4AQ9H788 454 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 JMJD4Q9H9V9 463 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 RTEL1Q9NZ71 1219 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 RCOR1Q9UKL0 485 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 SCN4AP35499 1836 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 STXBP3O00186 592 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 MBD3O95983 291 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 UBE2HP62256 183 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 NR5A1Q13285 461 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 SUPT20HL1Q3ZLR7 823 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 HOMER1Q86YM7 354 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 DCPSQ96C86 337 aaKnown RBP23.92■■□□□ 1.42
CASC3-203ENST00000418132 MTMR8Q96EF0 704 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 FTOQ9C0B1 505 aaKnown RBP eCLIP23.92■■□□□ 1.42
CASC3-203ENST00000418132 BRMS1Q9HCU9 246 aa23.92■■□□□ 1.42
CASC3-203ENST00000418132 CALML3P27482 149 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 EPHX2P34913 555 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 NLRP5P59047 1200 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 TYW1BQ6NUM6 668 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 HEATR3Q7Z4Q2 680 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 GOPCQ9HD26 462 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 POLR3EQ9NVU0 708 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 DOCK1Q14185 1865 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 hCG_1984214I3L0E3 225 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 INPP5BP32019 993 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 SLC16A2P36021 539 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 ZNF713Q8N859 430 aaPredicted RBP23.91■■□□□ 1.42
CASC3-203ENST00000418132 CCDC148Q8NFR7 591 aa23.91■■□□□ 1.42
CASC3-203ENST00000418132 ZC3H15Q8WU90 426 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms