RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 SRPRBQ9Y5M8 271 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 SPATA31A3Q5VYP0 1347 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 CCNT1O60563 726 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 CYP19A1P11511 503 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 KCTD16Q68DU8 428 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 CSGALNACT2Q8N6G5 542 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 IFT81Q8WYA0 676 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 AGPAT5Q9NUQ2 364 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 FRMPD2Q68DX3 1309 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 ACTN4O43707 911 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 AKR1B10O60218 316 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 ATP2C2O75185 946 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 COPB1P53618 953 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 PDE4DQ08499 809 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 LLGL1Q15334 1064 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 ENOX1Q8TC92 643 aaKnown RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 NAPGQ99747 312 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 C1orf167Q5SNV9 1468 aa14.85□□□□□ -0.03
TNFRSF8-203ENST00000417814 GYPCP04921 128 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 C2orf54Q08AI8 447 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 CCDC181Q5TID7 509 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 NELFCDQ8IXH7 590 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 CCDC155Q8N6L0 562 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 ERLIN1O75477 346 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 CSF1RP07333 972 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 PMS1P54277 932 aaKnown RBP14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 NAPAP54920 295 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 USP17L2Q6R6M4 530 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 TXNRD3Q86VQ6 643 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 MRFAP1Q9Y605 127 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 ZEB2O60315 1214 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 PLEKP08567 350 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 IKQ13123 557 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 SYCP1Q15431 976 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 DTHD1Q6ZMT9 781 aa14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 NBPF5PQ86XG9 351 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 GPR161Q8N6U8 529 aaKnown RBP14.84□□□□□ -0.03
TNFRSF8-203ENST00000417814 RIMBP2O15034 1052 aa14.83□□□□□ -0.03
TNFRSF8-203ENST00000417814 FCER1AP12319 257 aa14.83□□□□□ -0.03
TNFRSF8-203ENST00000417814 ERVK-24P63145 666 aa14.83□□□□□ -0.03
TNFRSF8-203ENST00000417814 SHISA4Q96DD7 197 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 EPN1Q9Y6I3 576 aaPredicted RBP14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 CPDO75976 1380 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 NCK2O43639 380 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 RPN1P04843 607 aaKnown RBP14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 NR1I3Q14994 352 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 DDB1Q16531 1140 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 SRGAP1Q7Z6B7 1085 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 KSR1Q8IVT5 923 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 PHLPP2Q6ZVD8 1323 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 JCADQ9P266 1359 aa14.83□□□□□ -0.04
TNFRSF8-203ENST00000417814 UBR1Q8IWV7 1749 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 NKRFO15226 690 aaKnown RBP eCLIP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 MFAP3LO75121 409 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 LIFRP42702 1097 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 TNNI2P48788 182 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 MAP3K9P80192 1104 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 KANK3Q6NY19 840 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 CCDC148Q8NFR7 591 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 CDC23Q9UJX2 597 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 ESYT3A0FGR9 886 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 ATP1A1P05023 1023 aaKnown RBP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 CACNA2D4Q7Z3S7 1137 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 SMARCC1Q92922 1105 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 FOXP1Q9H334 677 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 APBA1Q02410 837 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 MECOMQ03112 1051 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 PTF1AQ7RTS3 328 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 NOC4LQ9BVI4 516 aaKnown RBP14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
TNFRSF8-203ENST00000417814 KRT18P05783 430 aaKnown RBP14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 TMEM139Q8IV31 216 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 CNGA4Q8IV77 575 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 EHD4Q9H223 541 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 BCS1LQ9Y276 419 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 ARID4AP29374 1257 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 STIM1Q13586 685 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 PNMA1Q8ND90 353 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 CCDC42Q96M95 316 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 MMS19Q96T76 1030 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 FAM204AQ9H8W3 233 aa14.81□□□□□ -0.04
TNFRSF8-203ENST00000417814 MLXIPQ9HAP2 919 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms