RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 A0A0G2JLL6 359 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 CCDC196A0A1B0GTZ2 297 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 A0A1W2PRG0 241 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 RASSF10A6NK89 507 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 CPLX1O14810 134 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 NDUFB10O96000 172 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 HSP90AA1P07900 732 aaKnown RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 BMP3P12645 472 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 OSBPP22059 807 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 ANP32AP39687 249 aaKnown RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 ASPRV1Q53RT3 343 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 GPATCH4Q5T3I0 446 aaKnown RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 RCSD1Q6JBY9 416 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 PRRT2Q7Z6L0 340 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 SGMS1Q86VZ5 419 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 PROCA1Q8NCQ7 364 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 GMCL1P1Q8NEA9 526 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 ANKS1AQ92625 1134 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 MKL1Q969V6 931 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 IL17RAQ96F46 866 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 MYL10Q9BUA6 226 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 RPAP3Q9H6T3 665 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 GPHNQ9NQX3 736 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 RBM28Q9NW13 759 aaKnown RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
TRIM48-201ENST00000417545 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
TRIM48-201ENST00000417545 FLOT1O75955 427 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 VCAM1P19320 739 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 RXRAP19793 462 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 GJA5P36382 358 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 GNAQP50148 359 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 AKAP17AQ02040 695 aaKnown RBP9.86□□□□□ -0.83
TRIM48-201ENST00000417545 TOB2Q14106 344 aaPredicted RBP9.86□□□□□ -0.83
TRIM48-201ENST00000417545 BECN1Q14457 450 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 RTN1Q16799 776 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 APOA5Q6Q788 366 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 KCTD1Q719H9 257 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 ZSCAN31Q96LW9 406 aaPredicted RBP9.86□□□□□ -0.83
TRIM48-201ENST00000417545 ALDH8A1Q9H2A2 487 aaPredicted RBP9.86□□□□□ -0.83
TRIM48-201ENST00000417545 LIMCH1Q9UPQ0 1083 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
TRIM48-201ENST00000417545 WDR33Q9C0J8 1336 aaKnown RBP9.86□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L15C9J2P7 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L13C9JLJ4 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 TMEM232C9JQI7 657 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L11C9JVI0 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L18D6R9N7 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L22D6RA61 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L17D6RBQ6 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L19D6RCP7 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L20D6RJB6 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 CDKL5O76039 1030 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 GOLGA8HP0CJ92 632 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 PDHBP11177 359 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 STAT2P52630 851 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 INHBEP58166 350 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 CCT2P78371 535 aaKnown RBP9.85□□□□□ -0.83
TRIM48-201ENST00000417545 HTRA3P83110 453 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 USP17L24Q0WX57 530 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 DGKZQ13574 1117 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 GRM4Q14833 912 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 FAM160B2Q86V87 743 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 SMCR8Q8TEV9 937 aaPredicted RBP9.85□□□□□ -0.83
TRIM48-201ENST00000417545 CHURC1Q8WUH1 139 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 ZNF274Q96GC6 653 aaPredicted RBP9.85□□□□□ -0.83
TRIM48-201ENST00000417545 GMCL1Q96IK5 515 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 C12orf42Q96LP6 360 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 NUP88Q99567 741 aaPredicted RBP9.85□□□□□ -0.83
TRIM48-201ENST00000417545 KIF2CQ99661 725 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 SENP2Q9HC62 589 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 SH2B1Q9NRF2 756 aaPredicted RBP9.85□□□□□ -0.83
TRIM48-201ENST00000417545 FEM1BQ9UK73 627 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 AGTPBP1Q9UPW5 1226 aa9.85□□□□□ -0.83
TRIM48-201ENST00000417545 MYH6P13533 1939 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 KLRF2D3W0D1 207 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 AOC2O75106 756 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 NOVP48745 357 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 RCAN1P53805 252 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 KIF23Q02241 960 aaPredicted RBP9.84□□□□□ -0.83
TRIM48-201ENST00000417545 COL9A3Q14050 684 aaPredicted RBP9.84□□□□□ -0.83
TRIM48-201ENST00000417545 PPP2R5BQ15173 497 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 SIAH1Q8IUQ4 282 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 FANCBQ8NB91 859 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 SLF1Q9BQI6 1058 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 LZTS2Q9BRK4 669 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 CWC22Q9HCG8 908 aaKnown RBP9.84□□□□□ -0.83
TRIM48-201ENST00000417545 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 SEC63Q9UGP8 760 aaKnown RBP9.84□□□□□ -0.83
TRIM48-201ENST00000417545 BRPF3Q9ULD4 1205 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
TRIM48-201ENST00000417545 FAM155AB1AL88 458 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms