RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RCSD1Q6JBY9 416 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 GPR161Q8N6U8 529 aaKnown RBP16.39■□□□□ 0.21
HDAC9-208ENST00000417496 MCM9Q9NXL9 1143 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
HDAC9-208ENST00000417496 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 FBXO33Q7Z6M2 555 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 DYNLL2Q96FJ2 89 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 CTAGE1Q96RT6 745 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 BMP15O95972 392 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 PFKFB3Q16875 520 aaPredicted RBP16.38■□□□□ 0.21
HDAC9-208ENST00000417496 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 NELFBQ8WX92 580 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
HDAC9-208ENST00000417496 PRCPP42785 496 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
HDAC9-208ENST00000417496 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
HDAC9-208ENST00000417496 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 KIF5CO60282 957 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
HDAC9-208ENST00000417496 PMS1P54277 932 aaKnown RBP16.37■□□□□ 0.21
HDAC9-208ENST00000417496 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
HDAC9-208ENST00000417496 TFAP4Q01664 338 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 PAK1Q13153 545 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
HDAC9-208ENST00000417496 TPM1P09493 284 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 GYS2P54840 703 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 SLC35F6Q8N357 371 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 C4orf32Q8N8J7 132 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 GOLGA1Q92805 767 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 CHP1Q99653 195 aa16.37■□□□□ 0.21
HDAC9-208ENST00000417496 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
HDAC9-208ENST00000417496 USP17L3A6NCW0 530 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 USP17L4A6NCW7 530 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 KCNJ18B7U540 433 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 PES1O00541 588 aaKnown RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 ORC4O43929 436 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 TCP11X2Q5H9J9 407 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 CNGA4Q8IV77 575 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 ABHD10Q9NUJ1 306 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 TFR2Q9UP52 801 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 CT47A1Q5JQC4 288 aaPredicted RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 RASSF8Q8NHQ8 419 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 NAA15Q9BXJ9 866 aaKnown RBP16.36■□□□□ 0.21
HDAC9-208ENST00000417496 TMEM60Q9H2L4 133 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 ARFGAP3Q9NP61 516 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 TRIM10Q9UDY6 481 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
HDAC9-208ENST00000417496 LRRC10BA6NIK2 292 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 KRT9P35527 623 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 TXLNAP40222 546 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 STAT6P42226 847 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 UBXN1Q04323 297 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 SLC35G1Q2M3R5 365 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 SLC44A5Q8NCS7 719 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 KAT14Q9H8E8 782 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 LIMA1Q9UHB6 759 aaKnown RBP16.35■□□□□ 0.21
HDAC9-208ENST00000417496 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
HDAC9-208ENST00000417496 CLEC4GQ6UXB4 293 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 FUT8Q9BYC5 575 aa16.35■□□□□ 0.21
HDAC9-208ENST00000417496 SEMA3EO15041 775 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
HDAC9-208ENST00000417496 ST5P78524 1137 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
HDAC9-208ENST00000417496 INF2Q27J81 1249 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 SRGAP1Q7Z6B7 1085 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 ANKZF1Q9H8Y5 726 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 SUGCTQ9HAC7 445 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 PHLPP1O60346 1717 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
HDAC9-208ENST00000417496 DIXDC1Q155Q3 683 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 GRIK5Q16478 980 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 LRRC15Q8TF66 581 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 PNKPQ96T60 521 aa16.34■□□□□ 0.21
HDAC9-208ENST00000417496 CDC23Q9UJX2 597 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms