RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 MTMR4Q9NYA4 1195 aa18.57■□□□□ 0.56
ITGB1-204ENST00000417122 COL11A1P12107 1806 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-204ENST00000417122 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 RPTORQ8N122 1335 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 SLC15A5A6NIM6 579 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 TTLL1O95922 423 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 FGAP02671 866 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 HSPD1P10809 573 aaKnown RBP18.56■□□□□ 0.56
ITGB1-204ENST00000417122 ZKSCAN1P17029 563 aaPredicted RBP18.56■□□□□ 0.56
ITGB1-204ENST00000417122 PLS1Q14651 629 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 MKL1Q969V6 931 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.561e-13■■■■□ 20.9
ITGB1-204ENST00000417122 ANAPC4Q9UJX5 808 aa18.56■□□□□ 0.56
ITGB1-204ENST00000417122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.56
ITGB1-204ENST00000417122 NDUFB10O96000 172 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 ERCC3P19447 782 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
ITGB1-204ENST00000417122 GRB14Q14449 540 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 CCL14Q16627 93 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 PRPF38BQ5VTL8 546 aaKnown RBP18.55■□□□□ 0.56
ITGB1-204ENST00000417122 SHCBP1Q8NEM2 672 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 NUP88Q99567 741 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-204ENST00000417122 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
ITGB1-204ENST00000417122 INCENPQ9NQS7 918 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 SYNPO2Q9UMS6 1093 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 ADAMTS5Q9UNA0 930 aa18.55■□□□□ 0.56
ITGB1-204ENST00000417122 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
ITGB1-204ENST00000417122 TFRCP02786 760 aaKnown RBP18.54■□□□□ 0.56
ITGB1-204ENST00000417122 CAPN2P17655 700 aa18.54■□□□□ 0.56
ITGB1-204ENST00000417122 PDE4AP27815 886 aa18.54■□□□□ 0.56
ITGB1-204ENST00000417122 TMEM132BQ14DG7 1078 aa18.54■□□□□ 0.56
ITGB1-204ENST00000417122 NCAPG2Q86XI2 1143 aa18.54■□□□□ 0.56
ITGB1-204ENST00000417122 ZMYM6O95789 1325 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 HIP1O00291 1037 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 VWA5AO00534 786 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 STRNO43815 780 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 PRKAR2AP13861 404 aaKnown RBP18.53■□□□□ 0.56
ITGB1-204ENST00000417122 MAP3K21Q5TCX8 1036 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 CWC27Q6UX04 472 aaKnown RBP18.53■□□□□ 0.56
ITGB1-204ENST00000417122 LRRC47Q8N1G4 583 aaKnown RBP18.53■□□□□ 0.56
ITGB1-204ENST00000417122 GMCL1P1Q8NEA9 526 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 MROH8Q9H579 483 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 TACC3Q9Y6A5 838 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
ITGB1-204ENST00000417122 RANBP6O60518 1105 aaKnown RBP18.52■□□□□ 0.56
ITGB1-204ENST00000417122 SLC25A27O95847 323 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 HOXC6P09630 235 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 FGRP09769 529 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 CACNB2Q08289 660 aaPredicted RBP18.52■□□□□ 0.56
ITGB1-204ENST00000417122 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 UBE2Q1Q7Z7E8 422 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 NPLOC4Q8TAT6 608 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 CRISPLD2Q9H0B8 497 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
ITGB1-204ENST00000417122 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 ORC4O43929 436 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
ITGB1-204ENST00000417122 ADORA2AP29274 412 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 SLFN13Q68D06 897 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
ITGB1-204ENST00000417122 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 IL17RBQ9NRM6 502 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
ITGB1-204ENST00000417122 MKI67P46013 3256 aaKnown RBP18.51■□□□□ 0.55
ITGB1-204ENST00000417122 STAT3P40763 770 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 HAND2P61296 217 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 RRP12Q5JTH9 1297 aaKnown RBP18.5■□□□□ 0.55
ITGB1-204ENST00000417122 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 MFSD14CQ5VZR4 134 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 RIOX2Q8IUF8 465 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 FEM1BQ9UK73 627 aa18.5■□□□□ 0.55
ITGB1-204ENST00000417122 ZNF214Q9UL59 606 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-204ENST00000417122 ZNFX1Q9P2E3 1918 aaKnown RBP18.5■□□□□ 0.55
ITGB1-204ENST00000417122 NMT2O60551 498 aa18.49■□□□□ 0.55
ITGB1-204ENST00000417122 BMP3P12645 472 aa18.49■□□□□ 0.55
ITGB1-204ENST00000417122 ABRAQ8N0Z2 381 aa18.49■□□□□ 0.55
ITGB1-204ENST00000417122 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
ITGB1-204ENST00000417122 COBLO75128 1261 aa18.48■□□□□ 0.55
ITGB1-204ENST00000417122 ZBED4O75132 1171 aa18.48■□□□□ 0.55
ITGB1-204ENST00000417122 FCER1AP12319 257 aa18.48■□□□□ 0.55
ITGB1-204ENST00000417122 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
ITGB1-204ENST00000417122 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-204ENST00000417122 ANKLE1Q8NAG6 615 aa18.48■□□□□ 0.55
ITGB1-204ENST00000417122 KIFC2Q96AC6 838 aa18.48■□□□□ 0.55
ITGB1-204ENST00000417122 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-204ENST00000417122 LAMA4Q16363 1823 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
ITGB1-204ENST00000417122 COPB2P35606 906 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 SLC1A4P43007 532 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 NOVP48745 357 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 AKNAD1Q5T1N1 836 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 SNRNP48Q6IEG0 339 aaKnown RBP18.47■□□□□ 0.55
ITGB1-204ENST00000417122 MFSD6Q6ZSS7 791 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms