RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
LINC00475-202ENST00000416438 GDAQ9Y2T3 454 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 MYH6P13533 1939 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 BMP15O95972 392 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 TPM1P09493 284 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 CTAGE1Q96RT6 745 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 MTMR7Q9Y216 660 aa16.67■□□□□ 0.26
LINC00475-202ENST00000416438 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 ERVK-24P63145 666 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
LINC00475-202ENST00000416438 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
LINC00475-202ENST00000416438 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 PLIN2Q99541 437 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 FAM205AQ6ZU69 1335 aa16.66■□□□□ 0.26
LINC00475-202ENST00000416438 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
LINC00475-202ENST00000416438 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 PFKFB3Q16875 520 aaPredicted RBP16.65■□□□□ 0.26
LINC00475-202ENST00000416438 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 GOLGA1Q92805 767 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 KIF5CO60282 957 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 RCSD1Q6JBY9 416 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 SLC51AQ86UW1 340 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 RABGGTAQ92696 567 aa16.65■□□□□ 0.26
LINC00475-202ENST00000416438 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
LINC00475-202ENST00000416438 NAA15Q9BXJ9 866 aaKnown RBP16.65■□□□□ 0.26
LINC00475-202ENST00000416438 PRCPP42785 496 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 COPB1P53618 953 aaKnown RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 PAK1Q13153 545 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 SLC35F6Q8N357 371 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 SEMA3EO15041 775 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 GTPBP6O43824 516 aaPredicted RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 ORC4O43929 436 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 RPN1P04843 607 aaKnown RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 CHMP4BP1P59074 171 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 KIF4BQ2VIQ3 1234 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 TBC1D9BQ66K14 1250 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 CNGA4Q8IV77 575 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 DYNLL2Q96FJ2 89 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
LINC00475-202ENST00000416438 LIMA1Q9UHB6 759 aaKnown RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
LINC00475-202ENST00000416438 KCNJ18B7U540 433 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 TXLNAP40222 546 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 KCNJ12Q14500 433 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 LINC00116Q8NCU8 138 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 ARFGAP3Q9NP61 516 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 RWDD2AQ9UIY3 292 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 PCP11498 1178 aaKnown RBP16.63■□□□□ 0.25
LINC00475-202ENST00000416438 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
LINC00475-202ENST00000416438 TFAP4Q01664 338 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 TCP11X2Q5H9J9 407 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 CHP1Q99653 195 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 SLF1Q9BQI6 1058 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
LINC00475-202ENST00000416438 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 OAS2P29728 719 aaKnown RBP16.62■□□□□ 0.25
LINC00475-202ENST00000416438 PMS1P54277 932 aaKnown RBP16.62■□□□□ 0.25
LINC00475-202ENST00000416438 RPS8P62241 208 aaKnown RBP16.62■□□□□ 0.25
LINC00475-202ENST00000416438 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
LINC00475-202ENST00000416438 BLIDQ8IZY5 108 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 IL17RBQ9NRM6 502 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 KRT9P35527 623 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 STAT6P42226 847 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 GYS2P54840 703 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
LINC00475-202ENST00000416438 FUT8Q9BYC5 575 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
LINC00475-202ENST00000416438 TRAPPC10P48553 1259 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 ST5P78524 1137 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 UBXN1Q04323 297 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 CLEC4GQ6UXB4 293 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 ANKZF1Q9H8Y5 726 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 TRIM10Q9UDY6 481 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 TFR2Q9UP52 801 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 ITIH6Q6UXX5 1313 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 RREB1Q92766 1687 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 PES1O00541 588 aaKnown RBP16.61■□□□□ 0.25
LINC00475-202ENST00000416438 CYP2C19P33261 490 aa16.61■□□□□ 0.25
LINC00475-202ENST00000416438 LONRF2Q1L5Z9 754 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms