RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 MMS19Q96T76 1030 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 ST7Q9NRC1 585 aa11.79□□□□□ -0.52
COL12A1-203ENST00000416123 NPC1L1Q9UHC9 1359 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 ABCA8O94911 1581 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 TMEM232C9JQI7 657 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 CRCPO75575 148 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 ANKFY1Q9P2R3 1169 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 ADCY9O60503 1353 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 SERPINB2P05120 415 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 NFE2L3Q9Y4A8 694 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 PPP1R2P41236 205 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
COL12A1-203ENST00000416123 XKR9Q5GH70 373 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 RRAGAQ7L523 313 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 GDF11O95390 407 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 BCRP11274 1271 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 SLC9C1Q4G0N8 1177 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 MIGA2Q7L4E1 593 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 SPC25Q9HBM1 224 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 STK24Q9Y6E0 443 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 Q3C1V9 767 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 CTTNBP2NLQ9P2B4 639 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 ROBO2Q9HCK4 1378 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 PLEKHF1Q96S99 279 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 NAPGQ99747 312 aaPredicted RBP11.78□□□□□ -0.52
COL12A1-203ENST00000416123 CPLX4Q7Z7G2 160 aa11.78□□□□□ -0.52
COL12A1-203ENST00000416123 K7ENM7 598 aa11.77□□□□□ -0.52
COL12A1-203ENST00000416123 PDE8BO95263 885 aa11.77□□□□□ -0.52
COL12A1-203ENST00000416123 SEPT14Q6ZU15 432 aa11.77□□□□□ -0.52
COL12A1-203ENST00000416123 HGSO14964 777 aaPredicted RBP11.77□□□□□ -0.52
COL12A1-203ENST00000416123 DDX23Q9BUQ8 820 aaKnown RBP11.77□□□□□ -0.52
COL12A1-203ENST00000416123 APOL6Q9BWW8 343 aa11.77□□□□□ -0.52
COL12A1-203ENST00000416123 XDHP47989 1333 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 DLATP10515 647 aaKnown RBP11.77□□□□□ -0.53
COL12A1-203ENST00000416123 CYP4A11Q02928 519 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 TRIM7Q9C029 511 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 SLC16A2P36021 539 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 EVCP57679 992 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 GNPTABQ3T906 1256 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 KLHL7Q8IXQ5 586 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 CAPN2P17655 700 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 DCAF15Q66K64 600 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
COL12A1-203ENST00000416123 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 LIG4P49917 911 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 ABCB4P21439 1286 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 TRIM14Q14142 442 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 KMT5BQ4FZB7 885 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 NOX5Q96PH1 765 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 CLIC4Q9Y696 253 aa11.77□□□□□ -0.53
COL12A1-203ENST00000416123 KLHL30Q0D2K2 578 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SFMBT2Q5VUG0 894 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 MRPL11Q9Y3B7 192 aaKnown RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 YARSP54577 528 aaKnown RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SNAP25P60880 206 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 FMNL3Q8IVF7 1028 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 BSPRYQ5W0U4 402 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 DAAM2Q86T65 1068 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 RFX1P22670 979 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF75DP51815 510 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SCRN1Q12765 414 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SLFN13Q68D06 897 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 RASGRP4Q8TDF6 673 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SLC39A2Q9NP94 309 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 LRRIQ4A6NIV6 560 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 KIF22Q14807 665 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 C8orf74Q6P047 294 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 NOSTRINQ8IVI9 506 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
COL12A1-203ENST00000416123 NUP58Q9BVL2 599 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 SLC5A4Q9NY91 659 aa11.76□□□□□ -0.53
COL12A1-203ENST00000416123 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ITIH3Q06033 890 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 CCT6BQ92526 530 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 TET3O43151 1660 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 CEP104O60308 925 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PFKFB1P16118 471 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PLA2G4DQ86XP0 818 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 CSRNP2Q9H175 543 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 SCG2P13521 617 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF365Q70YC5 407 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms