RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 INTS4Q96HW7 963 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 ZSCAN31Q96LW9 406 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 CCDC17Q96LX7 622 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 RNF41Q9H4P4 317 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 DNAJC18Q9H819 358 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 CNNM2Q9H8M5 875 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 ARHGEF10LQ9HCE6 1279 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 SH2B1Q9NRF2 756 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 DDX60LQ5H9U9 1706 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 WDR19Q8NEZ3 1342 aa10.79□□□□□ -0.68
CHRNA1-206ENST00000416004 SH2B2O14492 632 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 SOX10P56693 466 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 TMEM179Q6ZVK1 233 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 IGDCC4Q8TDY8 1250 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 KRT23Q9C075 422 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 BIN2Q9UBW5 565 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 ROBO3Q96MS0 1386 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 PDIA3P30101 505 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 EVCP57679 992 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 PKP1Q13835 747 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 FAM110CQ1W6H9 321 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 TREML2Q5T2D2 321 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 RAB11FIP4Q86YS3 637 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 ANKRD13CQ8N6S4 541 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 LY9Q9HBG7 655 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 MKNK2Q9HBH9 465 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 CHMP5Q9NZZ3 219 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 SRRDQ9UH36 339 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 MYPNQ86TC9 1320 aa10.78□□□□□ -0.68
CHRNA1-206ENST00000416004 ORC4O43929 436 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 PFKFB2O60825 505 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 BCRP11274 1271 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 UBXN2AP68543 259 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 SCRN1Q12765 414 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 NFKBIBQ15653 356 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 ZYXQ15942 572 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 TMEM67Q5HYA8 995 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 GTF3C6Q969F1 213 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 ASCC2Q9H1I8 757 aaPredicted RBP10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 PTCH2Q9Y6C5 1203 aa10.77□□□□□ -0.69
CHRNA1-206ENST00000416004 KLF18A0A0U1RQI7 1052 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L15C9J2P7 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L13C9JLJ4 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L11C9JVI0 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L18D6R9N7 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L22D6RA61 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L17D6RBQ6 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L19D6RCP7 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L20D6RJB6 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 IFIT3O14879 490 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 RRP9O43818 475 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 RANBP6O60518 1105 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 HOXA7P31268 230 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 SHMT1P34896 483 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 RGS19P49795 217 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 RRP1BQ14684 758 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 ESR2Q92731 530 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 NAP1L2Q9ULW6 460 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 ADGRA2Q96PE1 1338 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 NMT2O60551 498 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 PCP11498 1178 aaKnown RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 CCNA1P78396 465 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 SEC23AQ15436 765 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 ZNF274Q96GC6 653 aaPredicted RBP10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 ARHGAP39Q9C0H5 1083 aa10.76□□□□□ -0.69
CHRNA1-206ENST00000416004 JAK2O60674 1132 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 TNKSO95271 1327 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 CTDNEP1O95476 244 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 RXRAP19793 462 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 GRK4P32298 578 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 LIFRP42702 1097 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 CDK8P49336 464 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 HERVK_113P62684 666 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ATP2B2Q01814 1243 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ICA1Q05084 483 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 GABPAQ06546 454 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 PDE4BQ07343 736 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 SEPT2Q15019 361 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 C16orf86Q6ZW13 317 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 SGMS1Q86VZ5 419 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ZNF444Q8N0Y2 327 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ENAHQ8N8S7 591 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 GPRC5AQ8NFJ5 357 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ARMC5Q96C12 935 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 ZDHHC9Q9Y397 364 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms