RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 CYP2B6P20813 491 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-209ENST00000415920 FAM47AQ5JRC9 791 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 C7orf61Q8IZ16 206 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 ESR2Q92731 530 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 KRT23Q9C075 422 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
CPNE1-209ENST00000415920 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 KDM4AO75164 1064 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 BACE1P56817 501 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 PABPC4Q13310 644 aaKnown RBP eCLIP16.03■□□□□ 0.162e-15■■■□□ 17.2
CPNE1-209ENST00000415920 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 Q3C1V9 767 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 NECAB2Q7Z6G3 386 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 ZNF444Q8N0Y2 327 aaPredicted RBP16.03■□□□□ 0.16
CPNE1-209ENST00000415920 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
CPNE1-209ENST00000415920 MYH6P13533 1939 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 GH2P01242 217 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 SYN1P17600 705 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
CPNE1-209ENST00000415920 HERVK_113P62684 666 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 IRX3P78415 501 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-209ENST00000415920 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 KCNB2Q92953 911 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 TBC1D2Q9BYX2 928 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 PORCNQ9H237 461 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 CABP5Q9NP86 173 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 RBPJLQ9UBG7 517 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 PARP14Q460N5 1801 aa16.02■□□□□ 0.16
CPNE1-209ENST00000415920 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
CPNE1-209ENST00000415920 CPA1P15085 419 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-209ENST00000415920 RBM25P49756 843 aaKnown RBP16.01■□□□□ 0.15
CPNE1-209ENST00000415920 ANAPC15P60006 121 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 TFAP4Q01664 338 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 RAB3GAP1Q15042 981 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 CCL14Q16627 93 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-209ENST00000415920 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 NEK1Q96PY6 1258 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 GDF15Q99988 308 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 UBAC1Q9BSL1 405 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 HMX1Q9NP08 348 aaPredicted RBP16.01■□□□□ 0.15
CPNE1-209ENST00000415920 EMILIN3Q9NT22 766 aa16.01■□□□□ 0.15
CPNE1-209ENST00000415920 PFASO15067 1338 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 ASNSP08243 561 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 FGRP09769 529 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 PSMA5P28066 241 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 CHST3Q7LGC8 479 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 IQCA1Q86XH1 822 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 ANKLE1Q8NAG6 615 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 TCEANC2Q96MN5 208 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
CPNE1-209ENST00000415920 TMOD4Q9NZQ9 345 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 FRMPD3Q5JV73 1810 aa16■□□□□ 0.15
CPNE1-209ENST00000415920 TNKSO95271 1327 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 A0A1W2PPC1 479 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 PRC1O43663 620 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 NMT2O60551 498 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-209ENST00000415920 MCM5P33992 734 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 ICA1Q05084 483 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
CPNE1-209ENST00000415920 SEPT2Q15019 361 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 GPRC5AQ8NFJ5 357 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 USP6NLQ92738 828 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 PAGR1Q9BTK6 254 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
CPNE1-209ENST00000415920 CNMDO75829 334 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 HMGB1P09429 215 aaKnown RBP15.98■□□□□ 0.15
CPNE1-209ENST00000415920 NT5C2P49902 561 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 ANTXR2P58335 489 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 ERVK-24P63145 666 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
CPNE1-209ENST00000415920 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
CPNE1-209ENST00000415920 ZYXQ15942 572 aaKnown RBP15.98■□□□□ 0.15
CPNE1-209ENST00000415920 NEDD1Q8NHV4 660 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 CEP95Q96GE4 821 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
CPNE1-209ENST00000415920 COL11A1P12107 1806 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-209ENST00000415920 ERICH2A1L162 156 aa15.97■□□□□ 0.15
CPNE1-209ENST00000415920 C19orf81C9J6K1 198 aa15.97■□□□□ 0.15
CPNE1-209ENST00000415920 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms