RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 MCM7P33993 719 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 SPAG1Q07617 926 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 KCNJ12Q14500 433 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 ADAMTS3O15072 1205 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 IRX5P78411 483 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-203ENST00000415380 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 CTR9Q6PD62 1173 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 ADAM21Q9UKJ8 722 aa20.33■□□□□ 0.85
SCARB1-203ENST00000415380 BAZ2AQ9UIF9 1905 aaKnown RBP20.33■□□□□ 0.84
SCARB1-203ENST00000415380 CACNA1SQ13698 1873 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 MYH8P13535 1937 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 RHOXF2BP0C7M4 288 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 HSPA2P54652 639 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 NLRP5P59047 1200 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 TUBB4BP68371 445 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 TRIM14Q14142 442 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 MCM6Q14566 821 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 ZNF658Q5TYW1 1059 aaPredicted RBP20.33■□□□□ 0.84
SCARB1-203ENST00000415380 HDXQ7Z353 690 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 SLF1Q9BQI6 1058 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 RHOXF2Q9BQY4 288 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 PDE11AQ9HCR9 933 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 ABCB6Q9NP58 842 aa20.33■□□□□ 0.84
SCARB1-203ENST00000415380 DLEC1Q9Y238 1755 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 KRT9P35527 623 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 EVX2Q03828 476 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 WHAMMP3Q1A5X7 153 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 ANKRD20A12PQ8NF67 263 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 PYM1Q9BRP8 204 aaKnown RBP20.32■□□□□ 0.84
SCARB1-203ENST00000415380 CCDC87Q9NVE4 849 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 GNL3LQ9NVN8 582 aaKnown RBP20.32■□□□□ 0.84
SCARB1-203ENST00000415380 MYO1AQ9UBC5 1043 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 PHLPP1O60346 1717 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 TULP2O00295 520 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 NMT2O60551 498 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 ERLIN1O75477 346 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 TRAPPC10P48553 1259 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 CTCFLQ8NI51 663 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-203ENST00000415380 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 EXOC4Q96A65 974 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 L1RE1Q9UN81 338 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 MAPK8IP1Q9UQF2 711 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCARB1-203ENST00000415380 GDAQ9Y2T3 454 aa20.32■□□□□ 0.84
SCARB1-203ENST00000415380 CTAGE15A4D2H0 777 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 RPN1P04843 607 aaKnown RBP20.31■□□□□ 0.84
SCARB1-203ENST00000415380 CTAGE8P0CG41 777 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 PCP11498 1178 aaKnown RBP20.31■□□□□ 0.84
SCARB1-203ENST00000415380 SCG2P13521 617 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 VEGFAP15692 232 aaPredicted RBP20.31■□□□□ 0.84
SCARB1-203ENST00000415380 CTAGE6Q86UF2 777 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 CTAGE4Q8IX94 777 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 COL22A1Q8NFW1 1626 aaPredicted RBP20.31■□□□□ 0.84
SCARB1-203ENST00000415380 USP17L12C9JPN9 530 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 USP17L21D6R901 530 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 RMND1Q9NWS8 449 aa20.31■□□□□ 0.84
SCARB1-203ENST00000415380 EXOC5O00471 708 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 PRCPP42785 496 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
SCARB1-203ENST00000415380 VSNL1P62760 191 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 UBXN1Q04323 297 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 CHP1Q99653 195 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.3■□□□□ 0.841e-7■■■■□ 24.4
SCARB1-203ENST00000415380 PIP4K2BP78356 416 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 PSD3Q9NYI0 1048 aa20.3■□□□□ 0.84
SCARB1-203ENST00000415380 AMPD2Q01433 879 aa20.29■□□□□ 0.84
SCARB1-203ENST00000415380 PFKFB3Q16875 520 aaPredicted RBP20.29■□□□□ 0.84
SCARB1-203ENST00000415380 FAM47AQ5JRC9 791 aa20.29■□□□□ 0.84
SCARB1-203ENST00000415380 MYO6Q9UM54 1294 aa20.29■□□□□ 0.84
SCARB1-203ENST00000415380 REXO2Q9Y3B8 237 aaKnown RBP20.29■□□□□ 0.84
SCARB1-203ENST00000415380 IRF2BP1Q8IU81 584 aa20.29■□□□□ 0.84
SCARB1-203ENST00000415380 TRERF1Q96PN7 1200 aa20.29■□□□□ 0.84
SCARB1-203ENST00000415380 LMAN1P49257 510 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 WWC2Q6AWC2 1192 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 MSL3Q8N5Y2 521 aaKnown RBP20.28■□□□□ 0.84
SCARB1-203ENST00000415380 C4orf32Q8N8J7 132 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 NOA1Q8NC60 698 aaKnown RBP20.28■□□□□ 0.84
SCARB1-203ENST00000415380 ZBTB9Q96C00 473 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 TRIM10Q9UDY6 481 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 EPN1Q9Y6I3 576 aaPredicted RBP20.28■□□□□ 0.84
SCARB1-203ENST00000415380 NDUFA10O95299 355 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
SCARB1-203ENST00000415380 ZSCAN26Q16670 478 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 NCAPH2Q6IBW4 605 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 VPS18Q9P253 973 aa20.28■□□□□ 0.84
SCARB1-203ENST00000415380 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 TRIM49BA6NDI0 452 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 H7C1D1 291 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 ORC4O43929 436 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 LONP1P36776 959 aaKnown RBP20.27■□□□□ 0.84
SCARB1-203ENST00000415380 RAD51AP2Q09MP3 1159 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 ARL6IP4Q66PJ3 421 aaKnown RBP20.27■□□□□ 0.84
SCARB1-203ENST00000415380 LAMB2P55268 1798 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 TTC26A0AVF1 554 aa20.27■□□□□ 0.84
SCARB1-203ENST00000415380 N4BP1O75113 896 aaKnown RBP20.27■□□□□ 0.84
SCARB1-203ENST00000415380 EIF3JO75822 258 aaKnown RBP20.27■□□□□ 0.84
SCARB1-203ENST00000415380 CAPN2P17655 700 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms