RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
PHTF2-204ENST00000415251 VEGFBP49765 207 aa16.03■□□□□ 0.16
PHTF2-204ENST00000415251 CCL15Q16663 113 aa16.03■□□□□ 0.16
PHTF2-204ENST00000415251 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
PHTF2-204ENST00000415251 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
PHTF2-204ENST00000415251 GPCPD1Q9NPB8 672 aa16.03■□□□□ 0.16
PHTF2-204ENST00000415251 TSHZ2Q9NRE2 1034 aa16.03■□□□□ 0.16
PHTF2-204ENST00000415251 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
PHTF2-204ENST00000415251 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 CDC27P30260 824 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
PHTF2-204ENST00000415251 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 GPAT2Q6NUI2 795 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
PHTF2-204ENST00000415251 SYNE3Q6ZMZ3 975 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 FANCBQ8NB91 859 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 RPAP3Q9H6T3 665 aaPredicted RBP16.02■□□□□ 0.16
PHTF2-204ENST00000415251 FAM217BQ9NTX9 383 aaPredicted RBP16.02■□□□□ 0.16
PHTF2-204ENST00000415251 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.16
PHTF2-204ENST00000415251 CETPP11597 493 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 BMP3P12645 472 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.15
PHTF2-204ENST00000415251 SLC16A2P36021 539 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 CCDC96Q2M329 555 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 NBPF11Q86T75 865 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 CCDC82Q8N4S0 544 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 LPAR1Q92633 364 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 ZNF274Q96GC6 653 aaPredicted RBP16.02■□□□□ 0.15
PHTF2-204ENST00000415251 GMCL1Q96IK5 515 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 UBA5Q9GZZ9 404 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 SYNPO2Q9UMS6 1093 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 LIMCH1Q9UPQ0 1083 aa16.02■□□□□ 0.15
PHTF2-204ENST00000415251 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
PHTF2-204ENST00000415251 BTBD19C9JJ37 291 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 TMEM232C9JQI7 657 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 DDAH1O94760 285 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
PHTF2-204ENST00000415251 ZNF543Q08ER8 600 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 GRM4Q14833 912 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 FASTKD5Q7L8L6 764 aaKnown RBP16.01■□□□□ 0.15
PHTF2-204ENST00000415251 FAM43AQ8N2R8 423 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 PROCA1Q8NCQ7 364 aaPredicted RBP16.01■□□□□ 0.15
PHTF2-204ENST00000415251 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
PHTF2-204ENST00000415251 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
PHTF2-204ENST00000415251 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
PHTF2-204ENST00000415251 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
PHTF2-204ENST00000415251 WDR46O15213 610 aaKnown RBP16■□□□□ 0.15
PHTF2-204ENST00000415251 METAP2P50579 478 aaKnown RBP eCLIP16■□□□□ 0.15
PHTF2-204ENST00000415251 SCRN1Q12765 414 aa16■□□□□ 0.15
PHTF2-204ENST00000415251 SLC35G1Q2M3R5 365 aa16■□□□□ 0.15
PHTF2-204ENST00000415251 DCAF4Q8WV16 495 aa16■□□□□ 0.15
PHTF2-204ENST00000415251 TESPA1A2RU30 521 aaPredicted RBP15.99■□□□□ 0.15
PHTF2-204ENST00000415251 MANSC4A6NHS7 340 aaPredicted RBP15.99■□□□□ 0.15
PHTF2-204ENST00000415251 KLRF2D3W0D1 207 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 ST3GAL1Q11201 340 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 NOGQ13253 232 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 CATSPERGQ6ZRH7 1159 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
PHTF2-204ENST00000415251 SLKQ9H2G2 1235 aaPredicted RBP15.99■□□□□ 0.15
PHTF2-204ENST00000415251 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 PEX10O60683 326 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 FLOT1O75955 427 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 CALM1P0DP23 149 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 CALM2P0DP24 149 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 CALM3P0DP25 149 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 RTN1Q16799 776 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 TMX3Q96JJ7 454 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L15C9J2P7 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L13C9JLJ4 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L11C9JVI0 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L18D6R9N7 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L22D6RA61 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L17D6RBQ6 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L19D6RCP7 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L20D6RJB6 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 PDHXO00330 501 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 CYTH3O43739 400 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 PFKFB2O60825 505 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 CYP2C8P10632 490 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 HOXA7P31268 230 aaPredicted RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 SNAP25P60880 206 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 USP17L24Q0WX57 530 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 PIAS4Q8N2W9 510 aaPredicted RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 SRBD1Q8N5C6 995 aaKnown RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 PIBF1Q8WXW3 757 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 MAP3K14Q99558 947 aa15.98■□□□□ 0.15
PHTF2-204ENST00000415251 P2RX7Q99572 595 aaKnown RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 ASCC2Q9H1I8 757 aaPredicted RBP15.98■□□□□ 0.15
PHTF2-204ENST00000415251 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
PHTF2-204ENST00000415251 GPATCH4Q5T3I0 446 aaKnown RBP15.97■□□□□ 0.15
PHTF2-204ENST00000415251 IFNL1Q8IU54 200 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms