RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 PCDHA11Q9Y5I1 949 aa7.1□□□□□ -1.27
PTPRK-209ENST00000415046 ZGLP1P0C6A0 271 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 LTKP29376 864 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 CWF19L2Q2TBE0 894 aaKnown RBP7.09□□□□□ -1.27
PTPRK-209ENST00000415046 SYDE1Q6ZW31 735 aaPredicted RBP7.09□□□□□ -1.27
PTPRK-209ENST00000415046 PHACTR4Q8IZ21 702 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 PDZD8Q8NEN9 1154 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 DIRC2Q96SL1 478 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 COPRSQ9NQ92 184 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 KIAA0586Q9BVV6 1533 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 PRXQ9BXM0 1461 aa7.09□□□□□ -1.27
PTPRK-209ENST00000415046 ROBO2Q9HCK4 1378 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 TLR3O15455 904 aaKnown RBP7.08□□□□□ -1.28
PTPRK-209ENST00000415046 KRT1P04264 644 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 MRPL58Q14197 206 aaKnown RBP7.08□□□□□ -1.28
PTPRK-209ENST00000415046 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 FBXL19Q6PCT2 694 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 VWCEQ96DN2 955 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 KIF2CQ99661 725 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 EPB41L4BQ9H329 900 aa7.08□□□□□ -1.28
PTPRK-209ENST00000415046 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
PTPRK-209ENST00000415046 PRG4Q92954 1404 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-209ENST00000415046 RGS13O14921 159 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 GREM1O60565 184 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 EIF4A3P38919 411 aaKnown RBP7.07□□□□□ -1.28
PTPRK-209ENST00000415046 MLECQ14165 292 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 TOX2Q96NM4 488 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 RNF32Q9H0A6 362 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 KIAA0556O60303 1618 aa7.07□□□□□ -1.28
PTPRK-209ENST00000415046 FITM1A5D6W6 292 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 SLC22A31A6NKX4 558 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 ATE1O95260 518 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-209ENST00000415046 TEKQ02763 1124 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 NR0B2Q15466 257 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 C1QL4Q86Z23 238 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 LILRA2Q8N149 483 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 OXR1Q8N573 874 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 DHX38Q92620 1227 aaKnown RBP7.06□□□□□ -1.28
PTPRK-209ENST00000415046 BCL2L13Q9BXK5 485 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 BRMS1Q9HCU9 246 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 DCP1AQ9NPI6 582 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-209ENST00000415046 GMIPQ9P107 970 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 PCDHB14Q9Y5E9 798 aa7.06□□□□□ -1.28
PTPRK-209ENST00000415046 TTBK1Q5TCY1 1321 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-209ENST00000415046 UBOX5O94941 541 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 GBP1P32455 592 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 CRKP46108 304 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 RNF4P78317 190 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 ARSHQ5FYA8 562 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 ZNF281Q9Y2X9 895 aa7.05□□□□□ -1.28
PTPRK-209ENST00000415046 GOLGA3Q08378 1498 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 NFIBO00712 420 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 C1QTNF9P0C862 333 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 MED14OSP0DP75 135 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 RAG1P15918 1043 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-209ENST00000415046 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 TIGD5Q53EQ6 642 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 HS2ST1Q7LGA3 356 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 ENOX1Q8TC92 643 aaKnown RBP7.04□□□□□ -1.28
PTPRK-209ENST00000415046 SYTL5Q8TDW5 730 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-209ENST00000415046 GIPC2Q8TF65 315 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 ZNF296Q8WUU4 475 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-209ENST00000415046 SYTL4Q96C24 671 aaPredicted RBP7.04□□□□□ -1.28
PTPRK-209ENST00000415046 HDAC8Q9BY41 377 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 C19orf44Q9H6X5 657 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 UGGT2Q9NYU1 1516 aa7.04□□□□□ -1.28
PTPRK-209ENST00000415046 DISP1Q96F81 1524 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 ADCY10Q96PN6 1610 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CFPP27918 469 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 RANGAP1P46060 587 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CHRNEQ04844 493 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 DUSP4Q13115 394 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 ZNF326Q5BKZ1 582 aaKnown RBP7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CDCP2Q5VXM1 449 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 IRF2BP1Q8IU81 584 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 LRRC56Q8IYG6 542 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.03□□□□□ -1.283e-9■■■□□ 16.7
PTPRK-209ENST00000415046 SLC6A17Q9H1V8 727 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 EHMT1Q9H9B1 1298 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 KCNK12Q9HB15 430 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CWC22Q9HCG8 908 aaKnown RBP7.03□□□□□ -1.28
PTPRK-209ENST00000415046 CD320Q9NPF0 282 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 SAMD9Q5K651 1589 aa7.03□□□□□ -1.28
PTPRK-209ENST00000415046 GLDCP23378 1020 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 RNF111Q6ZNA4 994 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 ANKS4BQ8N8V4 417 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 ZSCAN18Q8TBC5 510 aaPredicted RBP7.02□□□□□ -1.29
PTPRK-209ENST00000415046 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
PTPRK-209ENST00000415046 SLC26A8Q96RN1 970 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms