RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 ZNF784Q8NCA9 323 aaPredicted RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 FBXO18Q8NFZ0 1043 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 ACER1Q8TDN7 264 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 CLMNQ96JQ2 1002 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 SPATA32Q96LK8 384 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 DGKZQ13574 1117 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 SYAP1Q96A49 352 aaPredicted RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
LINC00330-201ENST00000414562 CFAP45Q9UL16 551 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
LINC00330-201ENST00000414562 BAZ2BQ9UIF8 2168 aaKnown RBP13.05□□□□□ -0.32
LINC00330-201ENST00000414562 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 GOLGA6L3A6NEY3 463 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 DDAH1O94760 285 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
LINC00330-201ENST00000414562 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 WRNIP1Q96S55 665 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 TMEM47Q9BQJ4 181 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 KAT14Q9H8E8 782 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
LINC00330-201ENST00000414562 DOCK1Q14185 1865 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 UBE2Q2LH0YL09 131 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 YY1P25490 414 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 ECE1P42892 770 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 SUPT20HL1Q3ZLR7 823 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
LINC00330-201ENST00000414562 ANKS1AQ92625 1134 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
LINC00330-201ENST00000414562 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
LINC00330-201ENST00000414562 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
LINC00330-201ENST00000414562 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 SNCAIPQ9Y6H5 919 aa13.04□□□□□ -0.32
LINC00330-201ENST00000414562 DEXIO95424 95 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 CEBPZQ03701 1054 aaKnown RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 TROAPQ12815 778 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 VGLL4Q14135 290 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 ZSCAN23Q3MJ62 389 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 KRT40Q6A162 431 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 ATL3Q6DD88 541 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 LRRC47Q8N1G4 583 aaKnown RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 LEO1Q8WVC0 666 aaPredicted RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 CLIP2Q9UDT6 1046 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 TRPM7Q96QT4 1865 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 ELP1O95163 1332 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 BRAPQ7Z569 592 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 ZFP91Q96JP5 570 aaPredicted RBP13.03□□□□□ -0.32
LINC00330-201ENST00000414562 TMEM63CQ9P1W3 806 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 STX8Q9UNK0 236 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
LINC00330-201ENST00000414562 KIF5BP33176 963 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00330-201ENST00000414562 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 LDLRAD1Q5T700 205 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 DCAF15Q66K64 600 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 TMEM179Q6ZVK1 233 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 PNMA1Q8ND90 353 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 PCNTO95613 3336 aa13.02□□□□□ -0.33
LINC00330-201ENST00000414562 CELF2O95319 508 aaKnown RBP13.01□□□□□ -0.33
LINC00330-201ENST00000414562 PTPRAP18433 802 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 GJA5P36382 358 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 KIF23Q02241 960 aaPredicted RBP13.01□□□□□ -0.33
LINC00330-201ENST00000414562 SCYL3Q8IZE3 742 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
LINC00330-201ENST00000414562 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 MTMR7Q9Y216 660 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 XBP1P17861 261 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 ICA1Q05084 483 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 MKL1Q969V6 931 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 NYAP2Q9P242 653 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
LINC00330-201ENST00000414562 PTPRFP10586 1907 aa13.01□□□□□ -0.33
LINC00330-201ENST00000414562 USP17L5A8MUK1 530 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
LINC00330-201ENST00000414562 NOL9Q5SY16 702 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms