RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CDKAL1Q5VV42 579 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 LARP1BQ659C4 914 aaKnown RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 KIAA1211LQ6NV74 962 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 C6orf15Q6UXA7 325 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 TMPRSS7Q7RTY8 843 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 TSPYL5Q86VY4 417 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 WFDC3Q8IUB2 231 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 DAGLBQ8NCG7 672 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 SYTL5Q8TDW5 730 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 MICAL1Q8TDZ2 1067 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 HDAC8Q9BY41 377 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 GP6Q9HCN6 339 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 SIRPGQ9P1W8 387 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 CCDC39Q9UFE4 941 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 SLC5A6Q9Y289 635 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 MSRB2Q9Y3D2 182 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 SHISA3A0PJX4 238 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 SIGLEC6O43699 453 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 HYAL3O43820 417 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 SNW1Q13573 536 aaKnown RBP5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 NFXL1Q6ZNB6 911 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 LRP10Q7Z4F1 713 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 TMC3Q7Z5M5 1100 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF655Q8N720 491 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 TRIM55Q9BYV6 548 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 ASCC2Q9H1I8 757 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 PCMTD2Q9NV79 361 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 WHRNQ9P202 907 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 PPP1R1BQ9UD71 204 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF451Q9Y4E5 1061 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
HMGB1P11-201ENST00000413899 ANKRD34BA5PLL1 514 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 B2RBV5 119 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 GJB6O95452 261 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 EPHX1P07099 455 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 NAT2P11245 290 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 CD247P20963 164 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 ARTNQ5T4W7 220 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 HEATR6Q6AI08 1181 aaKnown RBP5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 MRM1Q6IN84 353 aaKnown RBP5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF513Q8N8E2 541 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 UBE2FQ969M7 185 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 MKL1Q969V6 931 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 EPN3Q9H201 632 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 ATP13A1Q9HD20 1204 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 CHST7Q9NS84 486 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 LMCD1Q9NZU5 365 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZSWIM5Q9P217 1185 aa5.93□□□□□ -1.46
HMGB1P11-201ENST00000413899 U2SURPO15042 1029 aaKnown RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 DDAH1O94760 285 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 ITGA4P13612 1032 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 TPP2P29144 1249 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF445P59923 1031 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 BNIP3Q12983 259 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 CLEC16AQ2KHT3 1053 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 EEPD1Q7L9B9 569 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 SPRED2Q7Z698 418 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 RCC1LQ96I51 464 aaKnown RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 DNAJC2Q99543 621 aaKnown RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 PAK6Q9NQU5 681 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 FAM86C1Q9NVL1 165 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 GFOD1Q9NXC2 390 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 FBXL21Q9UKT6 434 aa5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 ANGEL1Q9UNK9 670 aaKnown RBP5.92□□□□□ -1.46
HMGB1P11-201ENST00000413899 SUSD5O60279 629 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ADAMTS4O75173 837 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 WNT11O96014 354 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ESR1P03372 595 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ANGEL2Q5VTE6 544 aaKnown RBP5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ARHGEF39Q8N4T4 335 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ST13P5Q8NFI4 369 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF669Q96BR6 464 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 TCTN2Q96GX1 697 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 APBA2Q99767 749 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 CCDC113Q9H0I3 377 aa5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 DIS3Q9Y2L1 958 aaKnown RBP5.91□□□□□ -1.46
HMGB1P11-201ENST00000413899 WASH4PA8MWX3 477 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 PPM1BO75688 479 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 GSNP06396 782 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 CD8BP10966 210 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 FUT4P22083 530 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 IKZF1Q13422 519 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 RNF111Q6ZNA4 994 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 USHBP1Q8N6Y0 703 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 LINC00116Q8NCU8 138 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 FLCNQ8NFG4 579 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 OSBPL2Q9H1P3 480 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZFP64Q9NPA5 681 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 ST7Q9NRC1 585 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 DUSP13Q9UII6 198 aa5.9□□□□□ -1.46
HMGB1P11-201ENST00000413899 BMP8BP34820 402 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 CD96P40200 585 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 CTSKP43235 329 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 RASGRF1Q13972 1273 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 SLC10A6Q3KNW5 377 aa5.89□□□□□ -1.47
HMGB1P11-201ENST00000413899 NOL9Q5SY16 702 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms