RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 NCOA7Q8NI08 942 aa19.98■□□□□ 0.79
PTPRC-206ENST00000413409 GPT2Q8TD30 523 aa19.98■□□□□ 0.79
PTPRC-206ENST00000413409 MYLIPQ8WY64 445 aa19.98■□□□□ 0.79
PTPRC-206ENST00000413409 PICK1Q9NRD5 415 aa19.98■□□□□ 0.79
PTPRC-206ENST00000413409 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
PTPRC-206ENST00000413409 TRIM75PA6NK02 468 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 KCNA4P22459 653 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 MCM5P33992 734 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 HMGN5P82970 282 aaKnown RBP19.97■□□□□ 0.79
PTPRC-206ENST00000413409 DIXDC1Q155Q3 683 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 LARP1BQ659C4 914 aaKnown RBP19.97■□□□□ 0.79
PTPRC-206ENST00000413409 TMED8Q6PL24 325 aaPredicted RBP19.97■□□□□ 0.79
PTPRC-206ENST00000413409 RALYLQ86SE5 291 aaKnown RBP19.97■□□□□ 0.79
PTPRC-206ENST00000413409 DENND2AQ9ULE3 1009 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 AGTPBP1Q9UPW5 1226 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 KIF3AQ9Y496 699 aa19.97■□□□□ 0.79
PTPRC-206ENST00000413409 PLXNB2O15031 1838 aa19.96■□□□□ 0.79
PTPRC-206ENST00000413409 VPS37CA5D8V6 355 aaPredicted RBP19.96■□□□□ 0.79
PTPRC-206ENST00000413409 MBD4O95243 580 aa19.96■□□□□ 0.79
PTPRC-206ENST00000413409 SCRN1Q12765 414 aa19.96■□□□□ 0.79
PTPRC-206ENST00000413409 STK3Q13188 491 aa19.96■□□□□ 0.79
PTPRC-206ENST00000413409 SYMPKQ92797 1274 aaKnown RBP19.96■□□□□ 0.79
PTPRC-206ENST00000413409 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
PTPRC-206ENST00000413409 TTYH1Q9H313 450 aaPredicted RBP19.96■□□□□ 0.79
PTPRC-206ENST00000413409 PHIPQ8WWQ0 1821 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 PATL2C9JE40 543 aaKnown RBP19.95■□□□□ 0.78
PTPRC-206ENST00000413409 IGSF3O75054 1194 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 PRKAR2AP13861 404 aaKnown RBP19.95■□□□□ 0.78
PTPRC-206ENST00000413409 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
PTPRC-206ENST00000413409 HAND2P61296 217 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 APOBRQ0VD83 1088 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 LHX8Q68G74 356 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 SH3BP5LQ7L8J4 393 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 CHAMP1Q96JM3 812 aa19.95■□□□□ 0.78
PTPRC-206ENST00000413409 PRC1O43663 620 aa19.94■□□□□ 0.78
PTPRC-206ENST00000413409 MAP3K10Q02779 954 aa19.94■□□□□ 0.78
PTPRC-206ENST00000413409 TRDNQ13061 729 aa19.94■□□□□ 0.78
PTPRC-206ENST00000413409 CAVIN1Q6NZI2 390 aaKnown RBP19.94■□□□□ 0.78
PTPRC-206ENST00000413409 NSUN7Q8NE18 718 aaKnown RBP19.94■□□□□ 0.78
PTPRC-206ENST00000413409 USP40Q9NVE5 1235 aa19.94■□□□□ 0.78
PTPRC-206ENST00000413409 SALL1Q9NSC2 1324 aa19.94■□□□□ 0.78
PTPRC-206ENST00000413409 CYP2B6P20813 491 aa19.93■□□□□ 0.78
PTPRC-206ENST00000413409 ZSCAN23Q3MJ62 389 aa19.93■□□□□ 0.78
PTPRC-206ENST00000413409 TBC1D10CQ8IV04 446 aa19.93■□□□□ 0.78
PTPRC-206ENST00000413409 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
PTPRC-206ENST00000413409 EPB41L4AQ9HCS5 686 aaPredicted RBP19.93■□□□□ 0.78
PTPRC-206ENST00000413409 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
PTPRC-206ENST00000413409 TNFRSF10AO00220 468 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 JAK2O60674 1132 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 PDIA3P30101 505 aaKnown RBP19.92■□□□□ 0.78
PTPRC-206ENST00000413409 ANTXR2P58335 489 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 SHHQ15465 462 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 LBHD1Q9BQE6 289 aaPredicted RBP19.92■□□□□ 0.78
PTPRC-206ENST00000413409 NACAP1Q9BZK3 213 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 NAPBQ9H115 298 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 CNPY2Q9Y2B0 182 aa19.92■□□□□ 0.78
PTPRC-206ENST00000413409 PTPDC1A2A3K4 754 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 APPP05067 770 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 CCND3P30281 292 aaPredicted RBP19.91■□□□□ 0.78
PTPRC-206ENST00000413409 PLA2G5P39877 138 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 UBE2HP62256 183 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 CACNB2Q08289 660 aaPredicted RBP19.91■□□□□ 0.78
PTPRC-206ENST00000413409 C9orf50Q5SZB4 431 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 NAA16Q6N069 864 aaPredicted RBP19.91■□□□□ 0.78
PTPRC-206ENST00000413409 IFNL3Q8IZI9 196 aa19.91■□□□□ 0.78
PTPRC-206ENST00000413409 TCHHQ07283 1943 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 MYH15Q9Y2K3 1946 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 GSG1L2A8MUP6 293 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 PEX10O60683 326 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 CTNND1O60716 968 aaKnown RBP19.9■□□□□ 0.78
PTPRC-206ENST00000413409 GCLCP48506 637 aaPredicted RBP19.9■□□□□ 0.78
PTPRC-206ENST00000413409 KRT85P78386 507 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 RGS22Q8NE09 1264 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 TMEM87BQ96K49 555 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 CNNM2Q9H8M5 875 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 ARMT1Q9H993 441 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 PNMA3Q9UL41 463 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 ELP1O95163 1332 aa19.9■□□□□ 0.78
PTPRC-206ENST00000413409 DDTLA6NHG4 134 aaPredicted RBP19.89■□□□□ 0.77
PTPRC-206ENST00000413409 DHX16O60231 1041 aaKnown RBP19.89■□□□□ 0.77
PTPRC-206ENST00000413409 CTDNEP1O95476 244 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTPRC-206ENST00000413409 CYP7A1P22680 504 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 PRDX5P30044 214 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
PTPRC-206ENST00000413409 LCORLQ8N3X6 602 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 USP38Q8NB14 1042 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 MTA3Q9BTC8 594 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 TMEM63CQ9P1W3 806 aa19.89■□□□□ 0.77
PTPRC-206ENST00000413409 SH2B2O14492 632 aaPredicted RBP19.88■□□□□ 0.77
PTPRC-206ENST00000413409 FOSL2P15408 326 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 RESTQ13127 1097 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 TJAP1Q5JTD0 557 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 GAS2L3Q86XJ1 694 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 PROCA1Q8NCQ7 364 aaPredicted RBP19.88■□□□□ 0.77
PTPRC-206ENST00000413409 WDR66Q8TBY9 1149 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 STAG1Q8WVM7 1258 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms