RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 RRAGBQ5VZM2 374 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 HIBCHQ6NVY1 386 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-209ENST00000412587 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
PBRM1-209ENST00000412587 HOMER3Q9NSC5 361 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 N4BP3O15049 544 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 VIMP08670 466 aaKnown RBP9.42□□□□□ -0.9
PBRM1-209ENST00000412587 FAM196AQ6ZSG2 479 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 ABCB6Q9NP58 842 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 SNX14Q9Y5W7 946 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 ASIC1P78348 528 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 MYO1EQ12965 1108 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 INTS8Q75QN2 995 aaKnown RBP9.42□□□□□ -0.9
PBRM1-209ENST00000412587 IQUBQ8NA54 791 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 SPATA31A3Q5VYP0 1347 aa9.42□□□□□ -0.9
PBRM1-209ENST00000412587 TPD52L2O43399 206 aaKnown RBP9.41□□□□□ -0.9
PBRM1-209ENST00000412587 NLGN1Q8N2Q7 840 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 DHX58Q96C10 678 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 EDC3Q96F86 508 aaKnown RBP9.41□□□□□ -0.9
PBRM1-209ENST00000412587 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 USH1CQ9Y6N9 552 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 MEFVO15553 781 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-209ENST00000412587 TPP2P29144 1249 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-209ENST00000412587 MFSD4BQ5TF39 518 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 IFT20Q8IY31 132 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 IFT81Q8WYA0 676 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 PPIP5K2O43314 1243 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 HAUS1Q96CS2 278 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 BICD1Q96G01 975 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 PSMA7O14818 248 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 MCM7P33993 719 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 GTF2IP78347 998 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 SEPT2Q15019 361 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 ATL3Q6DD88 541 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 DDX12PQ92771 950 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 GDAP1L1Q96MZ0 367 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 NAP1L3Q99457 506 aaPredicted RBP9.41□□□□□ -0.9
PBRM1-209ENST00000412587 ARHGEF10LQ9HCE6 1279 aa9.41□□□□□ -0.9
PBRM1-209ENST00000412587 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 FAM182BQ5T319 152 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 ZNF772Q68DY9 489 aaPredicted RBP9.4□□□□□ -0.9
PBRM1-209ENST00000412587 DTHD1Q6ZMT9 781 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 STK38LQ9Y2H1 464 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 IQGAP3Q86VI3 1631 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 FLOT1O75955 427 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 TRIM37O94972 964 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 SPAG1Q07617 926 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 DIXDC1Q155Q3 683 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.4□□□□□ -0.9
PBRM1-209ENST00000412587 COPRSQ9NQ92 184 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 PICK1Q9NRD5 415 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 TADA3O75528 432 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 DEXIO95424 95 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 GYG1P46976 350 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 PAK2Q13177 524 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 UBE4AQ14139 1066 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 APLFQ8IW19 511 aaPredicted RBP9.4□□□□□ -0.9
PBRM1-209ENST00000412587 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
PBRM1-209ENST00000412587 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
PBRM1-209ENST00000412587 ATP2B4P23634 1241 aa9.4□□□□□ -0.91
PBRM1-209ENST00000412587 C8orf74Q6P047 294 aa9.4□□□□□ -0.91
PBRM1-209ENST00000412587 PHLDB2Q86SQ0 1253 aa9.4□□□□□ -0.91
PBRM1-209ENST00000412587 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.91
PBRM1-209ENST00000412587 LEO1Q8WVC0 666 aaPredicted RBP9.4□□□□□ -0.91
PBRM1-209ENST00000412587 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.91
PBRM1-209ENST00000412587 CDK12Q9NYV4 1490 aaPredicted RBP9.4□□□□□ -0.91
PBRM1-209ENST00000412587 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.91
PBRM1-209ENST00000412587 AP1G2O75843 785 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 DLGAP5Q15398 846 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 LLPHQ9BRT6 129 aaKnown RBP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 GREM2Q9H772 168 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 FAF1Q9UNN5 650 aaPredicted RBP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
PBRM1-209ENST00000412587 RXRBP28702 533 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 ALDH3A1P30838 453 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 ICA1Q05084 483 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 CTDSPL2Q05D32 466 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 TMED1Q13445 227 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 SARM1Q6SZW1 724 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 C2CD5Q86YS7 1000 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 ARHGAP18Q8N392 663 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 DSCC1Q9BVC3 393 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 ANKRD62A6NC57 917 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 TCP10Q12799 353 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 RILPL1Q5EBL4 403 aa9.39□□□□□ -0.91
PBRM1-209ENST00000412587 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms