RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SLX4Q8IY92 1834 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 PARP1P09874 1014 aaKnown RBP28.02■■■□□ 2.08
VRK2-202ENST00000412104 STYK1Q6J9G0 422 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 KANK3Q6NY19 840 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 HHIPL2Q6UWX4 724 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 SYMPKQ92797 1274 aaKnown RBP28.02■■■□□ 2.08
VRK2-202ENST00000412104 DBNDD1Q9H9R9 158 aa28.02■■■□□ 2.08
VRK2-202ENST00000412104 STXBP3O00186 592 aa28.01■■■□□ 2.07
VRK2-202ENST00000412104 NT5DC1Q5TFE4 455 aa28.01■■■□□ 2.07
VRK2-202ENST00000412104 HEATR3Q7Z4Q2 680 aa28.01■■■□□ 2.07
VRK2-202ENST00000412104 TEKT1Q969V4 418 aa28.01■■■□□ 2.07
VRK2-202ENST00000412104 BARHL2Q9NY43 387 aa28.01■■■□□ 2.07
VRK2-202ENST00000412104 A0A087X0B3 334 aa28■■■□□ 2.07
VRK2-202ENST00000412104 H0YIN7 160 aa28■■■□□ 2.07
VRK2-202ENST00000412104 M0R2N6 131 aa28■■■□□ 2.07
VRK2-202ENST00000412104 PODNQ7Z5L7 613 aa28■■■□□ 2.07
VRK2-202ENST00000412104 DAGLBQ8NCG7 672 aa28■■■□□ 2.07
VRK2-202ENST00000412104 MAN1B1Q9UKM7 699 aa28■■■□□ 2.07
VRK2-202ENST00000412104 LRMPQ12912 555 aa28■■■□□ 2.07
VRK2-202ENST00000412104 CDC42EP5Q6NZY7 148 aa28■■■□□ 2.07
VRK2-202ENST00000412104 GRAMD1CQ8IYS0 662 aa28■■■□□ 2.07
VRK2-202ENST00000412104 ZNF646O15015 1829 aaPredicted RBP27.99■■■□□ 2.07
VRK2-202ENST00000412104 VWA3AA6NCI4 1184 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 BMP6P22004 513 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 MCM7P33993 719 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 GALNT17Q6IS24 598 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 USP17L2Q6R6M4 530 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 RASGRP4Q8TDF6 673 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 DHX58Q96C10 678 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 CPVLQ9H3G5 476 aa27.99■■■□□ 2.07
VRK2-202ENST00000412104 ANO8Q9HCE9 1232 aaPredicted RBP27.99■■■□□ 2.07
VRK2-202ENST00000412104 SARSP49591 514 aaKnown RBP27.98■■■□□ 2.07
VRK2-202ENST00000412104 MYL5Q02045 173 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 APOBEC3HQ6NTF7 200 aaKnown RBP27.98■■■□□ 2.07
VRK2-202ENST00000412104 SMARCE1Q969G3 411 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 OSBPL5Q9H0X9 879 aaPredicted RBP27.98■■■□□ 2.07
VRK2-202ENST00000412104 HSD3B7Q9H2F3 369 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 KCNQ5Q9NR82 932 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 FAM177A1Q8N128 213 aaPredicted RBP27.98■■■□□ 2.07
VRK2-202ENST00000412104 PCDHA6Q9UN73 950 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 R3HCC1Q9Y3T6 440 aaKnown RBP27.98■■■□□ 2.07
VRK2-202ENST00000412104 PCDHA8Q9Y5H6 950 aa27.98■■■□□ 2.07
VRK2-202ENST00000412104 SCN9AQ15858 1988 aa27.97■■■□□ 2.07
VRK2-202ENST00000412104 AKR1B1P15121 316 aa27.97■■■□□ 2.07
VRK2-202ENST00000412104 CACTINQ8WUQ7 758 aaKnown RBP27.97■■■□□ 2.07
VRK2-202ENST00000412104 MTMR4Q9NYA4 1195 aa27.97■■■□□ 2.07
VRK2-202ENST00000412104 SERPINB13Q9UIV8 391 aa27.97■■■□□ 2.07
VRK2-202ENST00000412104 CCDC194A0A1B0GVG4 234 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 IFNKQ9P0W0 207 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 SWAP70Q9UH65 585 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 IGKV6D-41A0A0C4DH26 115 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 SLFN14P0C7P3 912 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 SMARCA1P28370 1054 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 LMOD1P29536 600 aaPredicted RBP27.96■■■□□ 2.07
VRK2-202ENST00000412104 CRKP46108 304 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 CCDC34Q96HJ3 373 aa27.96■■■□□ 2.07
VRK2-202ENST00000412104 XPO4Q9C0E2 1151 aaKnown RBP27.96■■■□□ 2.07
VRK2-202ENST00000412104 MYO3BQ8WXR4 1341 aa27.95■■■□□ 2.07
VRK2-202ENST00000412104 USP17L5A8MUK1 530 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 SMC2O95347 1197 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 CHRNA5P30532 468 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 MORC3Q14149 939 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 SLC15A2Q16348 729 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 TRIML1Q8N9V2 468 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 SPATA20Q8TB22 786 aa27.95■■■□□ 2.06
VRK2-202ENST00000412104 IL17AQ16552 155 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 RRP36Q96EU6 259 aaKnown RBP27.94■■■□□ 2.06
VRK2-202ENST00000412104 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.94■■■□□ 2.06
VRK2-202ENST00000412104 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
VRK2-202ENST00000412104 ECE2O60344 883 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 PDHBP11177 359 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 STRIP1Q5VSL9 837 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 ARL6IP4Q66PJ3 421 aaKnown RBP27.94■■■□□ 2.06
VRK2-202ENST00000412104 SH3RF1Q7Z6J0 888 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 HOMER1Q86YM7 354 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 C4orf32Q8N8J7 132 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 ZDHHC15Q96MV8 337 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 ZMYND12Q9H0C1 365 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 C10orf71Q711Q0 1435 aa27.94■■■□□ 2.06
VRK2-202ENST00000412104 GREB1LQ9C091 1923 aaPredicted RBP27.93■■■□□ 2.06
VRK2-202ENST00000412104 SHMT1P34896 483 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 NAPAP54920 295 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 FKBP1AP62942 108 aaKnown RBP27.93■■■□□ 2.06
VRK2-202ENST00000412104 NFIAQ12857 509 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 FILIP1Q7Z7B0 1213 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 LRRC8AQ8IWT6 810 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 PAGE5Q96GU1 130 aa27.93■■■□□ 2.06
VRK2-202ENST00000412104 ATP1A3P13637 1013 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 FANCCQ00597 558 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 EZH2Q15910 746 aaKnown RBP27.92■■■□□ 2.06
VRK2-202ENST00000412104 DNTTIP2Q5QJE6 756 aaKnown RBP27.92■■■□□ 2.06
VRK2-202ENST00000412104 DACT2Q5SW24 774 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 KIAA0825Q8IV33 1275 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 LRRC47Q8N1G4 583 aaKnown RBP27.92■■■□□ 2.06
VRK2-202ENST00000412104 MLKLQ8NB16 471 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 CCDC12Q8WUD4 166 aaPredicted RBP27.92■■■□□ 2.06
VRK2-202ENST00000412104 CNKSR1Q969H4 720 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 SEC63Q9UGP8 760 aaKnown RBP27.92■■■□□ 2.06
VRK2-202ENST00000412104 HLA-DOAP06340 250 aa27.92■■■□□ 2.06
VRK2-202ENST00000412104 TERF1P54274 439 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms