RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 STXBP3O00186 592 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 BMP15O95972 392 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 RTKN2Q8IZC4 609 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 BARHL2Q9NY43 387 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 SLURP2P0DP57 97 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 ZNF174Q15697 407 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 LONRF3Q496Y0 759 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 HEATR3Q7Z4Q2 680 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 CLEC10AQ8IUN9 316 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 FAM13BQ9NYF5 915 aa23.6■■□□□ 1.37
ITSN2-205ENST00000412011 PTMAP06454 111 aaKnown RBP23.59■■□□□ 1.37
ITSN2-205ENST00000412011 PDHBP11177 359 aa23.59■■□□□ 1.37
ITSN2-205ENST00000412011 SMARCA1P28370 1054 aa23.59■■□□□ 1.37
ITSN2-205ENST00000412011 TRAPPC10P48553 1259 aa23.59■■□□□ 1.37
ITSN2-205ENST00000412011 LRRC47Q8N1G4 583 aaKnown RBP23.59■■□□□ 1.37
ITSN2-205ENST00000412011 CSRNP2Q9H175 543 aa23.59■■□□□ 1.37
ITSN2-205ENST00000412011 DHX36Q9H2U1 1008 aaKnown RBP23.59■■□□□ 1.37
ITSN2-205ENST00000412011 DNAJC18Q9H819 358 aa23.59■■□□□ 1.37
ITSN2-205ENST00000412011 DDTLA6NHG4 134 aaPredicted RBP23.58■■□□□ 1.37
ITSN2-205ENST00000412011 M0R2N6 131 aa23.58■■□□□ 1.37
ITSN2-205ENST00000412011 NPM3O75607 178 aaKnown RBP23.58■■□□□ 1.37
ITSN2-205ENST00000412011 EIF6P56537 245 aaKnown RBP23.58■■□□□ 1.37
ITSN2-205ENST00000412011 KRBA2Q6ZNG9 492 aa23.58■■□□□ 1.37
ITSN2-205ENST00000412011 CCDC148Q8NFR7 591 aa23.58■■□□□ 1.37
ITSN2-205ENST00000412011 PSMD1Q99460 953 aa23.58■■□□□ 1.37
ITSN2-205ENST00000412011 CLIP2Q9UDT6 1046 aa23.58■■□□□ 1.37
ITSN2-205ENST00000412011 TTLL1O95922 423 aa23.58■■□□□ 1.36
ITSN2-205ENST00000412011 SH3BP5LQ7L8J4 393 aa23.58■■□□□ 1.36
ITSN2-205ENST00000412011 DAGLBQ8NCG7 672 aa23.58■■□□□ 1.36
ITSN2-205ENST00000412011 CFAP100Q494V2 611 aa23.57■■□□□ 1.36
ITSN2-205ENST00000412011 CEP57L1Q8IYX8 460 aa23.57■■□□□ 1.36
ITSN2-205ENST00000412011 FAM177A1Q8N128 213 aaPredicted RBP23.57■■□□□ 1.36
ITSN2-205ENST00000412011 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 GALNT17Q6IS24 598 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 METTL16Q86W50 562 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 CNNM3Q8NE01 707 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 RRP36Q96EU6 259 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 CCDC17Q96LX7 622 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 TDRD3Q9H7E2 651 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 TUBE1Q9UJT0 475 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 COL4A5P29400 1685 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 FRMPD2Q68DX3 1309 aaPredicted RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 NLRP12P59046 1061 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 ATP2C1P98194 919 aaPredicted RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 ZRSR1Q15695 479 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 DPCR1Q3MIW9 517 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 ASPRV1Q53RT3 343 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 USP49Q70CQ1 688 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 DHX40Q8IX18 779 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 RASGRP4Q8TDF6 673 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 FERMT2Q96AC1 680 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 UBA5Q9GZZ9 404 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.56■■□□□ 1.36
ITSN2-205ENST00000412011 PI4KBQ9UBF8 816 aa23.56■■□□□ 1.36
ITSN2-205ENST00000412011 BIN1O00499 593 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 MPHOSPH10O00566 681 aaKnown RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 PTGDRQ13258 359 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 PNOCQ13519 176 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 ELOA2Q8IYF1 753 aaPredicted RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 RIOX1Q9H6W3 641 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 ZNF277Q9NRM2 450 aaPredicted RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 FAM196BA6NMK8 535 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 GOLGA6L19H0YKK7 550 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 POLR2DO15514 142 aaKnown RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 CLCN1P35523 988 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 HOMER1Q86YM7 354 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 ZSCAN29Q8IWY8 852 aaPredicted RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 PRMT6Q96LA8 375 aaPredicted RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 NAT10Q9H0A0 1025 aaKnown RBP23.55■■□□□ 1.36
ITSN2-205ENST00000412011 VAT1LQ9HCJ6 419 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 PCDHA6Q9UN73 950 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 PCDHA8Q9Y5H6 950 aa23.55■■□□□ 1.36
ITSN2-205ENST00000412011 RSBN1LQ6PCB5 846 aaPredicted RBP23.54■■□□□ 1.36
ITSN2-205ENST00000412011 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
ITSN2-205ENST00000412011 PIGSQ96S52 555 aa23.54■■□□□ 1.36
ITSN2-205ENST00000412011 MDM2Q00987 491 aaPredicted RBP23.53■■□□□ 1.36
ITSN2-205ENST00000412011 ZMYND12Q9H0C1 365 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 SEC63Q9UGP8 760 aaKnown RBP23.53■■□□□ 1.36
ITSN2-205ENST00000412011 SERTAD1Q9UHV2 236 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 ZKSCAN5Q9Y2L8 839 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 CCDC194A0A1B0GVG4 234 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 BECN2A8MW95 431 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 RAD17O75943 681 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 MCM7P33993 719 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 NAPAP54920 295 aa23.53■■□□□ 1.36
ITSN2-205ENST00000412011 FOXN1O15353 648 aa23.52■■□□□ 1.36
ITSN2-205ENST00000412011 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
ITSN2-205ENST00000412011 MSNP26038 577 aaKnown RBP23.52■■□□□ 1.36
ITSN2-205ENST00000412011 AOPEPQ8N6M6 819 aa23.52■■□□□ 1.36
ITSN2-205ENST00000412011 CCDC12Q8WUD4 166 aaPredicted RBP23.52■■□□□ 1.36
ITSN2-205ENST00000412011 BPIFA3Q9BQP9 254 aa23.52■■□□□ 1.36
ITSN2-205ENST00000412011 PSMD14O00487 310 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 ENTPD3O75355 529 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 ZNF543Q08ER8 600 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 CERKLQ49MI3 558 aaPredicted RBP23.52■■□□□ 1.35
ITSN2-205ENST00000412011 PLA2G4DQ86XP0 818 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 FOXP4Q8IVH2 680 aaPredicted RBP23.52■■□□□ 1.35
ITSN2-205ENST00000412011 EPSTI1Q96J88 318 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 GMLQ99445 158 aa23.52■■□□□ 1.35
ITSN2-205ENST00000412011 GPCPD1Q9NPB8 672 aa23.52■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms