RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 HTRA3P83110 453 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 ME3Q16798 604 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 CCDC96Q2M329 555 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 FAM83BQ5T0W9 1011 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 GADL1Q6ZQY3 521 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 PROCA1Q8NCQ7 364 aaPredicted RBP18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 SNX21Q969T3 373 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 MAP3K14Q99558 947 aa18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
AP001056.1-201ENST00000411956 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 CETPP11597 493 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 BMP3P12645 472 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 STK3Q13188 491 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 CCL15Q16663 113 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 CTCFLQ8NI51 663 aaPredicted RBP18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 CAPNS2Q96L46 248 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 MAD2L2Q9UI95 211 aa18.4■□□□□ 0.54
AP001056.1-201ENST00000411956 PALM3A6NDB9 673 aaPredicted RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 MANSC4A6NHS7 340 aaPredicted RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 PFKFB2O60825 505 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 HSPA6P17066 643 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 GRM1Q13255 1194 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 RTN1Q16799 776 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 FASTKD5Q7L8L6 764 aaKnown RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 STAG2Q8N3U4 1231 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 RPAP3Q9H6T3 665 aaPredicted RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 ISY1Q9ULR0 285 aaKnown RBP18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 AGTPBP1Q9UPW5 1226 aa18.39■□□□□ 0.53
AP001056.1-201ENST00000411956 PARP14Q460N5 1801 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 TESPA1A2RU30 521 aaPredicted RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 CDC27P30260 824 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 KIF5BP33176 963 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 CCT2P78371 535 aaKnown RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 SCRN1Q12765 414 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 GPAT2Q6NUI2 795 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 GTF3C6Q969F1 213 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 SLKQ9H2G2 1235 aaPredicted RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 NCOA5Q9HCD5 579 aaKnown RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 FAM217BQ9NTX9 383 aaPredicted RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
AP001056.1-201ENST00000411956 PLEKHA8P1O95397 391 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 TTBK2Q6IQ55 1244 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 HSCBQ8IWL3 235 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 TMX3Q96JJ7 454 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
AP001056.1-201ENST00000411956 A0A0G2JMZ2 1700 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 STAT2P52630 851 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 NOGQ13253 232 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 PPP2R5BQ15173 497 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 TMTC3Q6ZXV5 915 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 ANKRD23Q86SG2 305 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 PTPN18Q99952 460 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 CPVLQ9H3G5 476 aa18.36■□□□□ 0.53
AP001056.1-201ENST00000411956 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 WDR33Q9C0J8 1336 aaKnown RBP18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 KLRF2D3W0D1 207 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 PLA2G6O60733 806 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 AOC2O75106 756 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 GNAQP50148 359 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 KIF23Q02241 960 aaPredicted RBP18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 SREBF2Q12772 1141 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 SLC35G1Q2M3R5 365 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 BTNL9Q6UXG8 535 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 FAM160B2Q86V87 743 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 CCDC83Q8IWF9 413 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 RLFQ13129 1914 aa18.35■□□□□ 0.53
AP001056.1-201ENST00000411956 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms