RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 IFNL3Q8IZI9 196 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 U2AF1L4Q8WU68 220 aaKnown RBP20.26■□□□□ 0.83
HCG11-201ENST00000411553 TNNC2P02585 160 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 MCF2L2Q86YR7 1114 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 MCUR1Q96AQ8 359 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 TM6SF1Q9BZW5 370 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 VPS37BQ9H9H4 285 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 PLCB1Q9NQ66 1216 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 MAN1A1P33908 653 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
HCG11-201ENST00000411553 C2CD5Q86YS7 1000 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 AMFRQ9UKV5 643 aa20.26■□□□□ 0.83
HCG11-201ENST00000411553 TBC1D8O95759 1140 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 ATF7P17544 494 aaPredicted RBP20.25■□□□□ 0.83
HCG11-201ENST00000411553 XKR9Q5GH70 373 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
HCG11-201ENST00000411553 H0YCG3 227 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 GYG1P46976 350 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 GPR162Q16538 588 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 GOLGA5Q8TBA6 731 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 ADPGKQ9BRR6 497 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 GOLGA6BA6NDN3 693 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 LONRF2Q1L5Z9 754 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 BSPRYQ5W0U4 402 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 GADL1Q6ZQY3 521 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 VSIG1Q86XK7 387 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 PARP2Q9UGN5 583 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 SHANK2Q9UPX8 1470 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 RSAD2Q8WXG1 361 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 ATP2A3Q93084 1043 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 ZNF274Q96GC6 653 aaPredicted RBP20.25■□□□□ 0.83
HCG11-201ENST00000411553 VCX3BQ9H321 246 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 TECP42680 631 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 KRT81Q14533 505 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 PCDHA12Q9UN75 941 aa20.25■□□□□ 0.83
HCG11-201ENST00000411553 MYSM1Q5VVJ2 828 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 CACYBPQ9HB71 228 aaKnown RBP20.24■□□□□ 0.83
HCG11-201ENST00000411553 MAP7Q14244 749 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 PSMD6Q15008 389 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 RAB17Q9H0T7 212 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 RAB20Q9NX57 234 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 KIF11P52732 1056 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 TRIM50Q86XT4 487 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
HCG11-201ENST00000411553 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 N4BP1O75113 896 aaKnown RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 SCNN1DP51172 638 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 NOSTRINQ8IVI9 506 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 ANKRD35Q8N283 1001 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 K7ENM7 598 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 CAPN9O14815 690 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 ARHGAP24Q8N264 748 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 ZBTB38Q8NAP3 1195 aaPredicted RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 PNMA1Q8ND90 353 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 TEKT3Q9BXF9 490 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 KDRP35968 1356 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 SARNPP82979 210 aaKnown RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 LRRC47Q8N1G4 583 aaKnown RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 CCDC51Q96ER9 411 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 BTDP43251 543 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 ICA1Q05084 483 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 DOK7Q18PE1 504 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 ARHGEF2Q92974 986 aaKnown RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
HCG11-201ENST00000411553 MMS19Q96T76 1030 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
HCG11-201ENST00000411553 GADD45BO75293 160 aaPredicted RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 P3H4Q92791 437 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 TCOF1Q13428 1488 aaKnown RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 ATP10AO60312 1499 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 STAM2O75886 525 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 CNGA1P29973 690 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 BCAMP50895 628 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 DENND2CQ68D51 928 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 ADALQ6DHV7 355 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 SCYL2Q6P3W7 929 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 NUF2Q9BZD4 464 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 KIF24Q5T7B8 1368 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 HADHQ16836 314 aaKnown RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 SND1Q7KZF4 910 aaKnown RBP eCLIP20.22■□□□□ 0.83
HCG11-201ENST00000411553 NEK8Q86SG6 692 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 SDR42E1Q8WUS8 393 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 EDC3Q96F86 508 aaKnown RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 FAM193BQ96PV7 902 aaPredicted RBP20.22■□□□□ 0.83
HCG11-201ENST00000411553 KCNJ18B7U540 433 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 KLRF2D3W0D1 207 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 SORBS3O60504 671 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 OATP04181 439 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 PHKG2P15735 406 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 PDE6AP16499 860 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 GBP1P32455 592 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 KCNJ12Q14500 433 aa20.22■□□□□ 0.83
HCG11-201ENST00000411553 RIOK3O14730 519 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms