RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 Q3C1V9 767 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 LBX2Q6XYB7 198 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 GPRC5AQ8NFJ5 357 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 TRIM47Q96LD4 638 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 UBAC1Q9BSL1 405 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 MCOLN1Q9GZU1 580 aa28.06■■■□□ 2.08
UBE2E3-202ENST00000410062 TNKSO95271 1327 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 FMNL1O95466 1100 aaPredicted RBP28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 ERVK-9P63128 1117 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 ERVK-24P63145 666 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 DGKHQ86XP1 1220 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 TNS4Q8IZW8 715 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 ENAHQ8N8S7 591 aaPredicted RBP28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 ATG4CQ96DT6 458 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 BTBD7Q9P203 1132 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 ISY1Q9ULR0 285 aaKnown RBP28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 RABGAP1Q9Y3P9 1069 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 MGAMO43451 1857 aa28.05■■■□□ 2.08
UBE2E3-202ENST00000410062 BMP3P12645 472 aa28.04■■■□□ 2.08
UBE2E3-202ENST00000410062 SLC1A4P43007 532 aa28.04■■■□□ 2.08
UBE2E3-202ENST00000410062 ARHGEF6Q15052 776 aa28.04■■■□□ 2.08
UBE2E3-202ENST00000410062 CCDC178Q5BJE1 867 aa28.04■■■□□ 2.08
UBE2E3-202ENST00000410062 GMCL1Q96IK5 515 aa28.04■■■□□ 2.08
UBE2E3-202ENST00000410062 REC8O95072 547 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 FCGRTP55899 365 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 RNF20Q5VTR2 975 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 CHST3Q7LGC8 479 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 PPP1R9AQ9ULJ8 1098 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 HTTP42858 3142 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 MYPNQ86TC9 1320 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 MB21D2Q8IYB1 491 aaPredicted RBP28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 SLF1Q9BQI6 1058 aa28.03■■■□□ 2.08
UBE2E3-202ENST00000410062 KCTD1Q719H9 257 aa28.02■■■□□ 2.08
UBE2E3-202ENST00000410062 A0A0G2JMZ2 1700 aa28.01■■■□□ 2.08
UBE2E3-202ENST00000410062 COL9A3Q14050 684 aaPredicted RBP28.01■■■□□ 2.07
UBE2E3-202ENST00000410062 RASEFQ8IZ41 740 aa28.01■■■□□ 2.07
UBE2E3-202ENST00000410062 ANKS1AQ92625 1134 aa28.01■■■□□ 2.07
UBE2E3-202ENST00000410062 FEM1BQ9UK73 627 aa28.01■■■□□ 2.07
UBE2E3-202ENST00000410062 ADAMTS5Q9UNA0 930 aa28.01■■■□□ 2.07
UBE2E3-202ENST00000410062 TMEM232C9JQI7 657 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 TNPO2O14787 897 aaKnown RBP28■■■□□ 2.07
UBE2E3-202ENST00000410062 ANTXR2P58335 489 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 SEC23AQ15436 765 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 PKN2Q16513 984 aaKnown RBP28■■■□□ 2.07
UBE2E3-202ENST00000410062 DCAF4Q8WV16 495 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 KIFC2Q96AC6 838 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 PORCNQ9H237 461 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 KAT14Q9H8E8 782 aa28■■■□□ 2.07
UBE2E3-202ENST00000410062 COL11A1P12107 1806 aaPredicted RBP28■■■□□ 2.07
UBE2E3-202ENST00000410062 CCDC96Q2M329 555 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 IFIT1BQ5T764 474 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 MB21D1Q8N884 522 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 PRPF38AQ8NAV1 312 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 PNMA1Q8ND90 353 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 PTPN22Q9Y2R2 807 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 GTF3C3Q9Y5Q9 886 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 VWA5AO00534 786 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 IFIT3O14879 490 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 GNRH1P01148 92 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 PDHBP11177 359 aa27.99■■■□□ 2.07
UBE2E3-202ENST00000410062 CENPFP49454 3210 aa27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 FRMPD2Q68DX3 1309 aaPredicted RBP27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 HSPA4P34932 840 aa27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 STAT2P52630 851 aa27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 IKQ13123 557 aaPredicted RBP27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 PLS1Q14651 629 aa27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 FBXO46Q6PJ61 603 aaPredicted RBP27.98■■■□□ 2.07
UBE2E3-202ENST00000410062 DOCK3Q8IZD9 2030 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 ZKSCAN1P17029 563 aaPredicted RBP27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 CCNA1P78396 465 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 TMEM132BQ14DG7 1078 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 CCAR1Q8IX12 1150 aaKnown RBP27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 SPATC1LQ9H0A9 340 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 SENP2Q9HC62 589 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 SRRDQ9UH36 339 aa27.97■■■□□ 2.07
UBE2E3-202ENST00000410062 ERICH2A1L162 156 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 HOXD10P28358 340 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 MCM5P33992 734 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 PRKCZQ05513 592 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 SART3Q15020 963 aaKnown RBP27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 ADCK5Q3MIX3 580 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 TSGA10IPQ3SY00 556 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 TTBK2Q6IQ55 1244 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 CHURC1Q8WUH1 139 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 COA7Q96BR5 231 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 MOV10L1Q9BXT6 1211 aaKnown RBP27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 GPCPD1Q9NPB8 672 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 GABRQQ9UN88 632 aa27.96■■■□□ 2.07
UBE2E3-202ENST00000410062 PRC1O43663 620 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 MAPK4P31152 587 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 TMEM67Q5HYA8 995 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 FAM160B2Q86V87 743 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 REPS2Q8NFH8 660 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 PTCH2Q9Y6C5 1203 aa27.95■■■□□ 2.07
UBE2E3-202ENST00000410062 SNHG28P0DPA3 235 aa27.94■■■□□ 2.06
UBE2E3-202ENST00000410062 WTAPQ15007 396 aa27.94■■■□□ 2.06
UBE2E3-202ENST00000410062 WDR78Q5VTH9 848 aa27.94■■■□□ 2.06
UBE2E3-202ENST00000410062 IGDCC4Q8TDY8 1250 aa27.94■■■□□ 2.06
UBE2E3-202ENST00000410062 KCNB2Q92953 911 aa27.94■■■□□ 2.06
UBE2E3-202ENST00000410062 NEK1Q96PY6 1258 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms