RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 USP17L18D6R9N7 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L22D6RA61 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L17D6RBQ6 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L19D6RCP7 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L20D6RJB6 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 VCAM1P19320 739 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 MAP2K2P36507 400 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L24Q0WX57 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 CCDC96Q2M329 555 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 GADL1Q6ZQY3 521 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 CHURC1Q8WUH1 139 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 NUP133Q8WUM0 1156 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 SH2B1Q9NRF2 756 aaPredicted RBP19.42■□□□□ 0.7
IMP4-202ENST00000409649 PNMA3Q9UL41 463 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 BRPF3Q9ULD4 1205 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 PHIPQ8WWQ0 1821 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 PLA2G6O60733 806 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 HOXA7P31268 230 aaPredicted RBP19.41■□□□□ 0.7
IMP4-202ENST00000409649 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.7
IMP4-202ENST00000409649 ZNF543Q08ER8 600 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 GRM4Q14833 912 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 CYP4F22Q6NT55 531 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 CPLX2Q6PUV4 134 aaKnown RBP19.41■□□□□ 0.7
IMP4-202ENST00000409649 ANKRD23Q86SG2 305 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 FAM160B2Q86V87 743 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 MICU3Q86XE3 530 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 SPICE1Q8N0Z3 855 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 FANCBQ8NB91 859 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 FEM1BQ9UK73 627 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 ISY1Q9ULR0 285 aaKnown RBP19.41■□□□□ 0.7
IMP4-202ENST00000409649 NID2Q14112 1375 aa19.41■□□□□ 0.7
IMP4-202ENST00000409649 GOLGA8AA7E2F4 631 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 FDX1P10109 184 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 OSBPP22059 807 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 SMARCA1P28370 1054 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 PDIA3P30101 505 aaKnown RBP19.4■□□□□ 0.7
IMP4-202ENST00000409649 MKRN3Q13064 507 aaKnown RBP19.4■□□□□ 0.7
IMP4-202ENST00000409649 RTN1Q16799 776 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 SNX21Q969T3 373 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 SLKQ9H2G2 1235 aaPredicted RBP19.4■□□□□ 0.7
IMP4-202ENST00000409649 RPAP3Q9H6T3 665 aaPredicted RBP19.4■□□□□ 0.7
IMP4-202ENST00000409649 MTMR7Q9Y216 660 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 MYPNQ86TC9 1320 aa19.4■□□□□ 0.7
IMP4-202ENST00000409649 MYH4Q9Y623 1939 aa19.39■□□□□ 0.7
IMP4-202ENST00000409649 PALM3A6NDB9 673 aaPredicted RBP19.39■□□□□ 0.69
IMP4-202ENST00000409649 STAT2P52630 851 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 FAM83BQ5T0W9 1011 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 GTF3C2Q8WUA4 911 aaPredicted RBP19.39■□□□□ 0.69
IMP4-202ENST00000409649 BRI3BPQ8WY22 251 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 TANGO6Q9C0B7 1094 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 HOXC10Q9NYD6 342 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 TPCN1Q9ULQ1 816 aa19.39■□□□□ 0.69
IMP4-202ENST00000409649 WDR33Q9C0J8 1336 aaKnown RBP19.39■□□□□ 0.69
IMP4-202ENST00000409649 PFKFB2O60825 505 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 CDKL5O76039 1030 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 TM4SF4P48230 202 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 IRX3P78415 501 aaPredicted RBP19.38■□□□□ 0.69
IMP4-202ENST00000409649 IKQ13123 557 aaPredicted RBP19.38■□□□□ 0.69
IMP4-202ENST00000409649 GRM1Q13255 1194 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 MOGSQ13724 837 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 COG2Q14746 738 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 BTNL9Q6UXG8 535 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 CATSPERGQ6ZRH7 1159 aa19.38■□□□□ 0.69
IMP4-202ENST00000409649 PRPF38AQ8NAV1 312 aaKnown RBP19.38■□□□□ 0.69
IMP4-202ENST00000409649 TMEM232C9JQI7 657 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 KLRF2D3W0D1 207 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 CPLX1O14810 134 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 FLOT1O75955 427 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 KIF23Q02241 960 aaPredicted RBP19.37■□□□□ 0.69
IMP4-202ENST00000409649 KIAA1755Q5JYT7 1200 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 HSCBQ8IWL3 235 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 SLF1Q9BQI6 1058 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 MYL10Q9BUA6 226 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 RBM27Q9P2N5 1060 aaKnown RBP19.37■□□□□ 0.69
IMP4-202ENST00000409649 MAD2L2Q9UI95 211 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 PNMA2Q9UL42 364 aa19.37■□□□□ 0.69
IMP4-202ENST00000409649 BTBD19C9JJ37 291 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 VEGFBP49765 207 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 GPAT2Q6NUI2 795 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 KCTD1Q719H9 257 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 NOL8Q76FK4 1167 aaKnown RBP19.36■□□□□ 0.69
IMP4-202ENST00000409649 PARK7Q99497 189 aaKnown RBP19.36■□□□□ 0.69
IMP4-202ENST00000409649 NUP88Q99567 741 aaPredicted RBP19.36■□□□□ 0.69
IMP4-202ENST00000409649 GPCPD1Q9NPB8 672 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 HPS5Q9UPZ3 1129 aa19.36■□□□□ 0.69
IMP4-202ENST00000409649 LOC285556D6RIA3 1793 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 FRMPD2Q68DX3 1309 aaPredicted RBP19.35■□□□□ 0.69
IMP4-202ENST00000409649 PDHXO00330 501 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 TRAF1Q13077 416 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 BECN1Q14457 450 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 ME3Q16798 604 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 TREML2Q5T2D2 321 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 TMTC3Q6ZXV5 915 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 IFNL1Q8IU54 200 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 MB21D1Q8N884 522 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 SPZ1Q9BXG8 430 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 PPP1R9AQ9ULJ8 1098 aa19.35■□□□□ 0.69
IMP4-202ENST00000409649 K7ELQ4 463 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms