RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 PROCA1Q8NCQ7 364 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-203ENST00000409606 CCDC102AQ96A19 550 aa5.69□□□□□ -1.5
R3HDM1-203ENST00000409606 ALPK3Q96L96 1907 aa5.69□□□□□ -1.5
R3HDM1-203ENST00000409606 FDX1P10109 184 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 PTPRAP18433 802 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 NEK4P51957 841 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 MAPKAPK5Q8IW41 473 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 CAPNS2Q96L46 248 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 BARHL2Q9NY43 387 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 KDM4AO75164 1064 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 RAD17O75943 681 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 MMP1P03956 469 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 GJA5P36382 358 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 PPIL2Q13356 520 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 DLGAP5Q15398 846 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 SHROOM1Q2M3G4 852 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 EMILIN3Q9NT22 766 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 HPSEQ9Y251 543 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 ADAMTS3O15072 1205 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 CIITAP33076 1130 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 TOB1P50616 345 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 PPATQ06203 517 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 DGKZQ13574 1117 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 TYW1BQ6NUM6 668 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 KIAA0825Q8IV33 1275 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 P2RX7Q99572 595 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 ZNF341Q9BYN7 854 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 POLR3EQ9NVU0 708 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 MCM9Q9NXL9 1143 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
R3HDM1-203ENST00000409606 NMT2O60551 498 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 SLC3A2P08195 630 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 SYT1P21579 422 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 FGD1P98174 961 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 APOBRQ0VD83 1088 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 HYIQ5T013 277 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 GPATCH4Q5T3I0 446 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 SLC44A5Q8NCS7 719 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 CLEC4DQ8WXI8 215 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 JDP2Q8WYK2 163 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 USP6NLQ92738 828 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 TMEM39BQ9GZU3 492 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 VCPKMTQ9H867 229 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 JMJD4Q9H9V9 463 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 TSC2P49815 1807 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 DNAJC25-GNG10A0A024R161 153 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 WDR46O15213 610 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 EDNRBP24530 442 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 EPHX2P34913 555 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 CHAF1AQ13111 956 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 RASA3Q14644 834 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 GPR153Q6NV75 609 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 SPATA20Q8TB22 786 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 FGD4Q96M96 766 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 TANGO6Q9C0B7 1094 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 MORF4L1Q9UBU8 362 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 RCOR1Q9UKL0 485 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 PTPRSQ13332 1948 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 PATJQ8NI35 1801 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 C19orf81C9J6K1 198 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 DEXIO95424 95 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 ZSCAN22P10073 491 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 ZBTB48P10074 688 aaPredicted RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 TRAPPC10P48553 1259 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 TFAP4Q01664 338 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 PKP1Q13835 747 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 ARHGEF6Q15052 776 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 CST9Q5W186 159 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 ZNF579Q8NAF0 562 aaKnown RBP5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 BRF1Q92994 677 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 LENG9Q96B70 501 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 SLC38A10Q9HBR0 1119 aa5.67□□□□□ -1.5
R3HDM1-203ENST00000409606 KIF28PB7ZC32 967 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 CXCL11O14625 94 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 DDNO94850 711 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 TDO2P48775 406 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 TNNI2P48788 182 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 WTAPQ15007 396 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 MCTP2Q6DN12 878 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 NIPA1Q7RTP0 329 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 ENGASEQ8NFI3 743 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 CDCA5Q96FF9 252 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 FUCA2Q9BTY2 467 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 TMX4Q9H1E5 349 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 ZSCAN16Q9H4T2 348 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 RTEL1Q9NZ71 1219 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 CHMP5Q9NZZ3 219 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 PNMA2Q9UL42 364 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 PTPDC1A2A3K4 754 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 F13A1P00488 732 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 HOXD8P13378 290 aaPredicted RBP5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 PRPHP41219 470 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 BECN1Q14457 450 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 CATSPERGQ6ZRH7 1159 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 BRAPQ7Z569 592 aa5.66□□□□□ -1.5
R3HDM1-203ENST00000409606 KCTD17Q8N5Z5 321 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms