RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CPVLQ9H3G5 476 aa23.67■■□□□ 1.38
USP39-203ENST00000409470 BARHL2Q9NY43 387 aa23.67■■□□□ 1.38
USP39-203ENST00000409470 PCDHAC2Q9Y5I4 1007 aa23.67■■□□□ 1.38
USP39-203ENST00000409470 MYH8P13535 1937 aa23.67■■□□□ 1.38
USP39-203ENST00000409470 ADAMTS3O15072 1205 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 PPIP5K2O43314 1243 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 ZNF75DP51815 510 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 DEFB132Q7Z7B7 95 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 TUBE1Q9UJT0 475 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 MYO3BQ8WXR4 1341 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 USP17L5A8MUK1 530 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 CACNB3P54284 484 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 EIF6P56537 245 aaKnown RBP23.66■■□□□ 1.38
USP39-203ENST00000409470 TYW1BQ6NUM6 668 aa23.66■■□□□ 1.38
USP39-203ENST00000409470 METTL16Q86W50 562 aaKnown RBP23.66■■□□□ 1.38
USP39-203ENST00000409470 RRP36Q96EU6 259 aaKnown RBP23.66■■□□□ 1.38
USP39-203ENST00000409470 STXBP3O00186 592 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 SHMT1P34896 483 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 TCP10Q12799 353 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 PTGDRQ13258 359 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 ISM2Q6H9L7 571 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 GALNT17Q6IS24 598 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 PLA2G4DQ86XP0 818 aa23.65■■□□□ 1.38
USP39-203ENST00000409470 LRRC47Q8N1G4 583 aaKnown RBP23.65■■□□□ 1.38
USP39-203ENST00000409470 SEC63Q9UGP8 760 aaKnown RBP23.65■■□□□ 1.38
USP39-203ENST00000409470 MPHOSPH10O00566 681 aaKnown RBP23.64■■□□□ 1.38
USP39-203ENST00000409470 HOMER1Q86YM7 354 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 ZFPM1Q8IX07 1006 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 DRC7Q8IY82 874 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 PDILTQ8N807 584 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 ZNF830Q96NB3 372 aaPredicted RBP23.64■■□□□ 1.38
USP39-203ENST00000409470 BPIFA3Q9BQP9 254 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 VAT1LQ9HCJ6 419 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 CLIP2Q9UDT6 1046 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 SERPINA10Q9UK55 444 aa23.64■■□□□ 1.38
USP39-203ENST00000409470 IGKV6D-41A0A0C4DH26 115 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 TTLL1O95922 423 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 PDHBP11177 359 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 SMARCA1P28370 1054 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 MCM7P33993 719 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 ATP2C1P98194 919 aaPredicted RBP23.64■■□□□ 1.37
USP39-203ENST00000409470 ELOA2Q8IYF1 753 aaPredicted RBP23.64■■□□□ 1.37
USP39-203ENST00000409470 TTLL6Q8N841 843 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 RASGRP4Q8TDF6 673 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 EHD4Q9H223 541 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 SERTAD1Q9UHV2 236 aa23.64■■□□□ 1.37
USP39-203ENST00000409470 CCDC194A0A1B0GVG4 234 aa23.63■■□□□ 1.37
USP39-203ENST00000409470 USP49Q70CQ1 688 aa23.63■■□□□ 1.37
USP39-203ENST00000409470 CLEC10AQ8IUN9 316 aa23.63■■□□□ 1.37
USP39-203ENST00000409470 DAGLBQ8NCG7 672 aa23.63■■□□□ 1.37
USP39-203ENST00000409470 CCDC12Q8WUD4 166 aaPredicted RBP23.63■■□□□ 1.37
USP39-203ENST00000409470 DHX36Q9H2U1 1008 aaKnown RBP23.63■■□□□ 1.37
USP39-203ENST00000409470 C10orf71Q711Q0 1435 aa23.63■■□□□ 1.37
USP39-203ENST00000409470 NAPAP54920 295 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 SARM1Q6SZW1 724 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 ZSCAN29Q8IWY8 852 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 FAM177A1Q8N128 213 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 TTC12Q9H892 705 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 FRMPD2Q68DX3 1309 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 ZNF500O60304 480 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 TPM3P06753 285 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.62■■□□□ 1.37
USP39-203ENST00000409470 IDI2Q9BXS1 227 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 UBA5Q9GZZ9 404 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 PCDHA6Q9UN73 950 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 PCDHA8Q9Y5H6 950 aa23.62■■□□□ 1.37
USP39-203ENST00000409470 VWA3AA6NCI4 1184 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 FOXN1O15353 648 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 POSTNQ15063 836 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 ASPRV1Q53RT3 343 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 CCDC93Q567U6 631 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 KANK3Q6NY19 840 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 EPSTI1Q96J88 318 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 PCDHA5Q9Y5H7 936 aa23.61■■□□□ 1.37
USP39-203ENST00000409470 M0R2N6 131 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 MDM2Q00987 491 aaPredicted RBP23.6■■□□□ 1.37
USP39-203ENST00000409470 ATP2B2Q01814 1243 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 GRIPAP1Q4V328 841 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 SYMPKQ92797 1274 aaKnown RBP23.6■■□□□ 1.37
USP39-203ENST00000409470 PIGSQ96S52 555 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 TRIM34Q9BYJ4 488 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 FAM198AQ9UFP1 575 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 ZNF646O15015 1829 aaPredicted RBP23.6■■□□□ 1.37
USP39-203ENST00000409470 YDJCA8MPS7 323 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 FOXP4Q8IVH2 680 aaPredicted RBP23.6■■□□□ 1.37
USP39-203ENST00000409470 CCDC34Q96HJ3 373 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 CCDC17Q96LX7 622 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 PI4KBQ9UBF8 816 aa23.6■■□□□ 1.37
USP39-203ENST00000409470 SMTNL1A8MU46 457 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 ACTN4O43707 911 aaKnown RBP23.59■■□□□ 1.37
USP39-203ENST00000409470 SLURP2P0DP57 97 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 TPM4P67936 248 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 SOGA3Q5TF21 947 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 RTKN2Q8IZC4 609 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 DHX58Q96C10 678 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 ZMYND12Q9H0C1 365 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 C6orf50Q9HD87 102 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 DDTLA6NHG4 134 aaPredicted RBP23.59■■□□□ 1.37
USP39-203ENST00000409470 RIOX1Q9H6W3 641 aa23.59■■□□□ 1.37
USP39-203ENST00000409470 GPCPD1Q9NPB8 672 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms