RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FBXO28Q9NVF7 368 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 LOC285556D6RIA3 1793 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 RASSF10A6NK89 507 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 CXCL11O14625 94 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 ZBTB48P10074 688 aaPredicted RBP16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 CDC27P30260 824 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 USP14P54578 494 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 MOGSQ13724 837 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 ANKRD1Q15327 319 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 UBA5Q9GZZ9 404 aa16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 ALDH8A1Q9H2A2 487 aaPredicted RBP16.47■□□□□ 0.23
CHRNA1-204ENST00000409323 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 PARP1P09874 1014 aaKnown RBP16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 HSPA6P17066 643 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 GTF2A2P52657 109 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 SNAP25P60880 206 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 CCDC102AQ96A19 550 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 SLKQ9H2G2 1235 aaPredicted RBP16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
CHRNA1-204ENST00000409323 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 DDAH1O94760 285 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 BMP3P12645 472 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 VEGFBP49765 207 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 ZNF543Q08ER8 600 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 SCRN1Q12765 414 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 GRM4Q14833 912 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 RTN1Q16799 776 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 SH3D19Q5HYK7 790 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 CCDC83Q8IWF9 413 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 FANCBQ8NB91 859 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 HHIPL1Q96JK4 782 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 PTPN18Q99952 460 aa16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
CHRNA1-204ENST00000409323 hCG_1642624A0A1W2PR95 340 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 PEX10O60683 326 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 SNHG28P0DPA3 235 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 CETPP11597 493 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 GPAT2Q6NUI2 795 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 FAM43AQ8N2R8 423 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
CHRNA1-204ENST00000409323 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 EVCP57679 992 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 LPAR1Q92633 364 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 ZNF274Q96GC6 653 aaPredicted RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 C12orf42Q96LP6 360 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 PARP14Q460N5 1801 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 PALM3A6NDB9 673 aaPredicted RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 FLOT1O75955 427 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 CYP2C8P10632 490 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 TAL1P17542 331 aaPredicted RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 SPRYD3Q8NCJ5 442 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 AGTPBP1Q9UPW5 1226 aa16.43■□□□□ 0.22
CHRNA1-204ENST00000409323 PDHXO00330 501 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 PFKFB2O60825 505 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 CALM1P0DP23 149 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 CALM2P0DP24 149 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 CALM3P0DP25 149 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 FASTKD5Q7L8L6 764 aaKnown RBP16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 PHKBQ93100 1093 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 SYNPO2Q9UMS6 1093 aa16.42■□□□□ 0.22
CHRNA1-204ENST00000409323 RLFQ13129 1914 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 CYTH3O43739 400 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 STAT2P52630 851 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 CATSPERGQ6ZRH7 1159 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 COL11A1P12107 1806 aaPredicted RBP16.41■□□□□ 0.22
CHRNA1-204ENST00000409323 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
CHRNA1-204ENST00000409323 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms