RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 C17orf53Q8N3J3 647 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 CCDC97Q96F63 343 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 EZH2Q15910 746 aaKnown RBP13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 AOC3Q16853 763 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 KIAA0753Q2KHM9 967 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 HSF2BPO75031 334 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 CCDC175P0C221 793 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 CALCRLQ16602 461 aa13.11□□□□□ -0.31
RAPGEF3-204ENST00000405493 ELP1O95163 1332 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 BMP3P12645 472 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 TTC38Q5R3I4 469 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 SYT10Q6XYQ8 523 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 SDR42E1Q8WUS8 393 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 BIRC3Q13489 604 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAPGEF3-204ENST00000405493 TXKP42681 527 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 MMP14P50281 582 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 TM6SF1Q9BZW5 370 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 RSPH14Q9UHP6 348 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 MINPP1Q9UNW1 487 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 E7EWF7 191 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 TGFB2P61812 414 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 DIS3L2Q8IYB7 885 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 TACC1O75410 805 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 CAPN2P17655 700 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 MED23Q9ULK4 1368 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 MNAT1P51948 309 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 MADDQ8WXG6 1647 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 STX10O60499 249 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 FDX1P10109 184 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 ECE1P42892 770 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 SSX2IPQ9Y2D8 614 aa13.09□□□□□ -0.31
RAPGEF3-204ENST00000405493 TNKSO95271 1327 aa13.08□□□□□ -0.31
RAPGEF3-204ENST00000405493 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.31
RAPGEF3-204ENST00000405493 FER1L4A9Z1Z3 1794 aa13.08□□□□□ -0.31
RAPGEF3-204ENST00000405493 A0A0G2JLW4 131 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 P4HA1P13674 534 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 GJC1P36383 396 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 KRT83P78385 493 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 TFDP1Q14186 410 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 ANTXR1Q9H6X2 564 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 CEP112Q8N8E3 955 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 CAPZA3Q96KX2 299 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 ISCA1Q9BUE6 129 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 HARSP12081 509 aaKnown RBP13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 STAT2P52630 851 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 FAM160A1Q05DH4 1040 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 E9PCH4 1651 aa13.08□□□□□ -0.32
RAPGEF3-204ENST00000405493 ADORA1P30542 326 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 TUBB4BP68371 445 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 DDX12PQ92771 950 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 DTNBO60941 627 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 IPO4Q8TEX9 1081 aaKnown RBP13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 GUCA1BQ9UMX6 200 aa13.07□□□□□ -0.32
RAPGEF3-204ENST00000405493 TECPR2O15040 1411 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms